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sw_10_scaffold_29738_1

Organism: SW_10_Chlorophyta_55_6

partial RP 13 / 55 MC: 4 BSCG 9 / 51 MC: 3 ASCG 8 / 38
Location: 1..678

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Chlorella variabilis RepID=E1ZPI5_CHLVA similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 208.0
  • Bit_score: 349
  • Evalue 3.30e-93
Pre-mRNA-processing factor 8 {ECO:0000313|EMBL:JAC81165.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 206.0
  • Bit_score: 357
  • Evalue 1.30e-95
PRP8; splicing factor, component of the U5 snRNP and of the spliceosome; K12856 pre-mRNA-processing factor 8 similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 204.0
  • Bit_score: 347
  • Evalue 3.90e-93

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 678
GAGGAAGAAGAAGAAGATGATGACTTCGGACTTCCCGAGGATGTTGTACCTGCGCTTTCGGACACGCCGCTCTACACCGAGAACACTAACGCTGGCATTTCCCTGCTGTGGGCACCGGAGCCATTCAACAAGCGCTCCGACTACACGAAGCGCGCACAGGATGTACCACTTGTCAACAGCTGGTTTAAAGAGCACTGCCCCTCTTCATACCCGGTGAAAGTGCGTGTGAGCTACCAAAAGCTGCTGAAGAACTGGGTGCTCAATAAGCTCCACCAACGGCCACCGAAGAATCAGCGCAAACGCTACTTGTACCGCTCGCTCCTTCGGACAAAGTTCTTCCAGAAGACGGAGCTTGACTGGGTTGAAGCCGGGTTGCAGGTGTGTCGCCAAGGATACAACATGCTCAACCTGCTGATCCATCGCAAGGGCATCAACTATCTGCACTTGGACTATAACTTCAACCTCAAGCCCGTCAAAACGCTGACGACAAAGGAACGCAAGAAATCGCGCTTCGGGAATGCATTCCACCTCTGCCGCGAGATTCTACGGTTGACGAAGCTCGTCGTTGACAGCAACGTGCAATTTAGGCTCGGGAACGTAGACGCGTACCAGTTGGCTGACGGCTTNNNNNNNNNNNNNNNNNNNNNNNNTACACTTTCAATCACGTCGGGCAGCTGA
PROTEIN sequence
Length: 226
EEEEEDDDFGLPEDVVPALSDTPLYTENTNAGISLLWAPEPFNKRSDYTKRAQDVPLVNSWFKEHCPSSYPVKVRVSYQKLLKNWVLNKLHQRPPKNQRKRYLYRSLLRTKFFQKTELDWVEAGLQVCRQGYNMLNLLIHRKGINYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDSNVQFRLGNVDAYQLADGXXXXXXXXXTLSITSGS*