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sw_10_scaffold_6653_2

Organism: SW_10_Chlorophyta_55_6

partial RP 13 / 55 MC: 4 BSCG 9 / 51 MC: 3 ASCG 8 / 38
Location: 504..1736

Top 3 Functional Annotations

Value Algorithm Source
Ribosome biogenesis protein RPF1, contains IMP4 domain (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01H25_OSTTA similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 419.0
  • Bit_score: 293
  • Evalue 3.90e-76
Anticodon-binding {ECO:0000313|EMBL:CEF96505.1}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.;" source="Ostreo similarity UNIPROT
DB: UniProtKB
  • Identity: 41.3
  • Coverage: 419.0
  • Bit_score: 315
  • Evalue 1.00e-82
Ribosome biogenesis protein RPF1, contains IMP4 domain (ISS); K14846 ribosome production factor 1 similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 419.0
  • Bit_score: 293
  • Evalue 1.20e-76

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Taxonomy

Ostreococcus tauri → Ostreococcus → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1233
ATGGCCAAGGAGGCGAGAAGCAAAGGAGGGAAGAAGGCGAAGGTGAAGGGTCGGAGCAAATCTCAGGGCGTTGCCTCTTCCTCCAAGCAGCCCCGCAAGAAAACCGATTTGATGCGCAAGGTTGCTGCAGGCGCGAACGACACCGGGCCTTCCGTTGGGCAGCTCACTTCCCACGTGGGTAACAAAGACGCTCGTGCGCGCCTGTACGCGCAAGCAAAGCGCCAAAAGGCTGCTAGGCAATCGCAACAGCGCCGCGAGCGCCAGCATGCTGCCGCACGTGCACATGAGCTCGGGGAAGAACCCCCTACTAAGACGCCACCGCGCACCATAGAGCACGCTCGCGAGGCTGATGAGACCCGGGTGCTGCCCTCAGACCCTGAGGTCCATGCTGACGAGGAGGAAGACGAATTCGCCGATGAGTTGGAGCAAGGACCCCAACAAGCCGTCGTCACCACATCCCGTCGCCCCAGTGGCCGCGCCTTCAAACTCCTCGCCGAGCTCATGGAGTGTCTTCCGTCCGCAACCTTCTACGCTCGCAAATCCCTCAACCTCAGAGAGGTGTGCCGCCAGGCTGAAAACGCCGGCTTTGGCCACGTGTTGTGTCTGCACGAGGATAAGAGCTTCAGTAAAGGCAGCCATGCCAACGGCCTGCTATGGATCAAGCTTCCCCACGGACCCACCGCTCGCTTCAAGGTGAGCAACGTCAAGCTCCGCAGTGACATACCGAACGCCGGCCGTCCAACCGCACATAAGCCTGAGCTCATCACCAACAACTTCACCACCCGGCTGGGCCACCGCGTCGAGCGCATGGTATCCTCCTTGTTTCCGCGTCAACCGCATCGACGAGGAAGACGTGTTGTGACGCTGCACAACCAGCGCGATTTTATCTTCCTTCGACACCATCGTTACATGTTTGAGCAGCGGCAGGACAGCAAGAGAGGGCACGCATTGCATGGGCGTGGTCATCTATCTGAGGGTGAGCCCGAGCCAAAGTACCAGAAAGGCACTCAGAGCCGCAAGAGACGACACACGCCCCCAGGTGCAGACAAGACAGAGTCTCAAAGCGCGATGGACTCGTTGCAGGTTCGACTGCAGGAGCTTGGGCCGAGGATGACGCTAAAGCTTCTTAGCTTACAGAAAGGTGTCTTCGACCCGCAGCACGGAGAGTTTGAGTGGGTTCGACCTGCGGACAAGCACGGTCCAAATGCGAGCCGCAAGAAATTCTATCTATAG
PROTEIN sequence
Length: 411
MAKEARSKGGKKAKVKGRSKSQGVASSSKQPRKKTDLMRKVAAGANDTGPSVGQLTSHVGNKDARARLYAQAKRQKAARQSQQRRERQHAAARAHELGEEPPTKTPPRTIEHAREADETRVLPSDPEVHADEEEDEFADELEQGPQQAVVTTSRRPSGRAFKLLAELMECLPSATFYARKSLNLREVCRQAENAGFGHVLCLHEDKSFSKGSHANGLLWIKLPHGPTARFKVSNVKLRSDIPNAGRPTAHKPELITNNFTTRLGHRVERMVSSLFPRQPHRRGRRVVTLHNQRDFIFLRHHRYMFEQRQDSKRGHALHGRGHLSEGEPEPKYQKGTQSRKRRHTPPGADKTESQSAMDSLQVRLQELGPRMTLKLLSLQKGVFDPQHGEFEWVRPADKHGPNASRKKFYL*