ggKbase home page

sw_10_scaffold_6279_1

Organism: SW_10_Chlorophyta_55_6

partial RP 13 / 55 MC: 4 BSCG 9 / 51 MC: 3 ASCG 8 / 38
Location: comp(6..2069)

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) RepID=A4RS49_OSTLU similarity UNIREF
DB: UNIREF100
  • Identity: 31.6
  • Coverage: 212.0
  • Bit_score: 102
  • Evalue 1.60e-18
hypothetical protein; K14301 nuclear pore complex protein Nup107 similarity KEGG
DB: KEGG
  • Identity: 31.6
  • Coverage: 212.0
  • Bit_score: 102
  • Evalue 5.10e-19
Uncharacterized protein {ECO:0000313|EMBL:ABO94311.1}; TaxID=436017 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 31.6
  • Coverage: 212.0
  • Bit_score: 102
  • Evalue 2.30e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ostreococcus 'lucimarinus' → Ostreococcus → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 2064
ATGCGGGCGGTTTGGCGCCTCTTGCGTGCAGGGAGGCCAAAGAGCGCCCGCTCGTTGTGCGAGCACGCTGGCCAGCATTGGCGCTCGCTGTCCCTTGGCGCATCGCTTGAGTGGTCGCCTGTACCTGTTGGCGCTGCTGCCTTGGACGAGGCTAAAGAGGATGCCAGCACAGGCAATGAGGCATCGCTCCGAGAGCAAGTTGCTGCAGAAATAAATGGATTCCACCCAGTGCAGCGCATGCGCTGGAAGTGGGCTTGCGCCATGGCCGCTGAGCAGGCGCATGCCAACGGCAATGTCATGGAGGGCGCCGTCTACGGTATCCTTGCTGGTGTCAGCAGTGCTGCAATCAAAGGTGTTGAGCGAGACTGGCACGAGGAGCTGTGGGTTCATTGCCGCTGTGCACTCGACAATGAAGCGGACCGTCAGCTCCATGCTACTAGCGGTGGTGTCTTTGAGAATGGAATGCATGCAGATGACCATGGCGCAGTGACGCTCGATAAGGATTGTAGCGGCATGAACATCGATGATGTTGTGCGATGGGATCCGCGTGAGGGCGAGAGTGAACCAGAGTTGGCCAACATCTTCGACCTGACGGGTGTGAATGGTGTACGTCACCAGATGGGTTCGAAGCGCGTGCAGAGGCTCTGCGAACTTGAGGAGTACATGGCCCGTCCAGACTGGAGTGCTCTACTCGAAGCATTGGGAAGGATGGTTCAGCCTCAAAGCAGCAGCAGCTTCGATGTGCACAATCTCCGCATCGCTGCCACGCTGCTTGCATTCCTACATAAGCAGTGCCTGCCCGATGGTGAGGAGCTTCCTTCGACGCTGGCACATCCGTCGATCCAGAAGGACAACATTCTGCGCGCATACGTCTGGCGCCTTATAGACAGTGCGCAGGTCGAGATTGTGCCGCTGTACGTCCGCTACATGCAGAGCGCCACTATCAAGCTCACATACACGCAGATGCTTGAGTTCTTCGTGAACCAGGACCTTGAACATAAGATGCGCGTGCTTAAAGGTGCGCGCATGAACTTGCCCAAGATGGACAGCGAAGGATCAGTGGACAATGTGCTGCAGAACTTCTTTGCAAACCTTACGTCGCTCTCGTACATGGCCCGACGAAATGATCCCACGCTCTCGTTTTCTGAGCAGAGATATCATGCCCTCGATTGGATTGTTGCTGATTTCCAGAGGCCGGCAGCACAACTAGTGAATAATGCGCAATGCATTGTGCGGGACCTAGTCCTCTCTGGAAACGTAAATCTCGCGAAAACATTGTTTGAAAGCACCTTTGAGTACTATCATGACCATTTCCATCGTCACATCAGGAAGAGCGATGCAGAAGAGGCCGCTCAGTGGCGTTTGTACTTCAAGTGCTATGACTTGCTACATCGGTATAACATTCTGGATGAACAATCTGACGCCGGTAGCGCGAACGCTGAAAACGCTGAAGAAACTGGCCACCAGGCTGTGGAGGCTATGCTTGCCTTGCTGTATCATTCCGAAGAGCATGGTGAATGCTGGATGGACCCAGATTTTCTGCATCAGTGCGACAGCAGTGAAGCTTTGCCTGTTAATGAGCTTACTCGTGTTGAGATTGAGCTGGTCCTTCGCTGGGAGCAGAGCCAAGGATCGGATGAATTGCCGAAAAGTGCCCACAGCCATCTCACTACGAAGCGCTATGCTGGGAAACATGAGTTTGTGAGCATAAAGATTTTGGATCACATGGACACCGCGGTGTGCAAAGCAAGAGACTTGATTCTCGAAGCTGAAATCGACGGGGCGTACACGCTTGTGTACTCCAAGTGTACAAGCGTAGAGGAAAAGAGAGAGCGAGACGAGCGCGCTGCAAGAAGTCTGCTGCGCACTCGTGCACTACCTCCGCTTGTAATTGAAGCAGCAAAAGTGGAAGCACGCGTGTCCCCCGGGCACGGAAGGATCATTGTGTCAGTTGCGGACGACCGGAAAGGTGAATATCAGCTCTTCACACCCGAGCAAATCTATGCACTGCTTTTGGCAGAACGCGATTCAGAGCTTAATCATATGTCTTCAAACAGTTGTTAA
PROTEIN sequence
Length: 688
MRAVWRLLRAGRPKSARSLCEHAGQHWRSLSLGASLEWSPVPVGAAALDEAKEDASTGNEASLREQVAAEINGFHPVQRMRWKWACAMAAEQAHANGNVMEGAVYGILAGVSSAAIKGVERDWHEELWVHCRCALDNEADRQLHATSGGVFENGMHADDHGAVTLDKDCSGMNIDDVVRWDPREGESEPELANIFDLTGVNGVRHQMGSKRVQRLCELEEYMARPDWSALLEALGRMVQPQSSSSFDVHNLRIAATLLAFLHKQCLPDGEELPSTLAHPSIQKDNILRAYVWRLIDSAQVEIVPLYVRYMQSATIKLTYTQMLEFFVNQDLEHKMRVLKGARMNLPKMDSEGSVDNVLQNFFANLTSLSYMARRNDPTLSFSEQRYHALDWIVADFQRPAAQLVNNAQCIVRDLVLSGNVNLAKTLFESTFEYYHDHFHRHIRKSDAEEAAQWRLYFKCYDLLHRYNILDEQSDAGSANAENAEETGHQAVEAMLALLYHSEEHGECWMDPDFLHQCDSSEALPVNELTRVEIELVLRWEQSQGSDELPKSAHSHLTTKRYAGKHEFVSIKILDHMDTAVCKARDLILEAEIDGAYTLVYSKCTSVEEKRERDERAARSLLRTRALPPLVIEAAKVEARVSPGHGRIIVSVADDRKGEYQLFTPEQIYALLLAERDSELNHMSSNSC*