ggKbase home page
This organism can only be binned in the context of its binning project CG2_30_FULL_binning. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

sw_10_scaffold_8170_2

Organism: SW_10_Chlorophyta_55_6

partial RP 13 / 55 MC: 4 BSCG 9 / 51 MC: 3 ASCG 8 / 38
Location: comp(606..920)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1D8K8_EMIHU similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 51.0
  • Bit_score: 73
  • Evalue 1.20e-10
Putative ABC transporter {ECO:0000313|EMBL:EOD23384.1}; Uncharacterized protein {ECO:0000313|EnsemblProtists:EOD23384}; TaxID=280463 species="Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 51.0
  • Bit_score: 73
  • Evalue 1.70e-10
non-transporter ABC protein (ISS); K06185 ATP-binding cassette, subfamily F, member 2 similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 56.0
  • Bit_score: 72
  • Evalue 8.70e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Emiliania huxleyi → Emiliania → Isochrysidales → Eukaryota

Sequences

DNA sequence
Length: 315
TTGGCTGTGGCACTGATCATTTTTCCCCATACCTTCTGTGACGCAGCGCACATCATTGCTCTTGATGGTGCGTTGAGTCTCTGCTGCTTCACTATCCTCAAGGATACTAAGATGCATGCTGCTCTTGCTGCATCTCAATCCGCAGAGCCAACAAACTACTTGGATCAGGAAACGCTGGGTGCGCTCGTGAACGCGCTAAAGAAGTTCAAAGGCGGCTTTCTGACAGTGACACACAATGAGCACTTTGTGAGGGAAGTGTGTAAAGAGAGATGGTACGTAGAGGGTGGGCAAGTGACACCATCAAAGTCGTCTTGA
PROTEIN sequence
Length: 105
LAVALIIFPHTFCDAAHIIALDGALSLCCFTILKDTKMHAALAASQSAEPTNYLDQETLGALVNALKKFKGGFLTVTHNEHFVREVCKERWYVEGGQVTPSKSS*