ggKbase home page

sw_10_scaffold_5534_2

Organism: SW_10_Chlorophyta_55_6

partial RP 13 / 55 MC: 4 BSCG 9 / 51 MC: 3 ASCG 8 / 38
Location: 668..2329

Top 3 Functional Annotations

Value Algorithm Source
Topoisomerase IA (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 348.0
  • Bit_score: 207
  • Evalue 1.10e-50
Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) RepID=A4RUT1_OSTLU similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 362.0
  • Bit_score: 295
  • Evalue 1.40e-76
Uncharacterized protein {ECO:0000313|EMBL:ABO95306.1}; Flags: Fragment;; TaxID=436017 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostre similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 362.0
  • Bit_score: 295
  • Evalue 1.90e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ostreococcus 'lucimarinus' → Ostreococcus → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1662
TTGGCCCATGCCAATTCCCAACCCTCGGCTTCATCGTGCAGCGCTGGTGGGAGCACCAGGCGCACACGCCTGAGGACTTTTGGCGCATCAAACTCGAGCACACGTTTGCTACTTGTTATCTCTTGGTCCCTCCTCATACACTCTGTACTCCGTCTGCCTTATCCTCTTCGCCACTGTACCCGTTGTTGCAGGCCAGCTGGATGTCAAGGAACAGCATACTTTAATTGGGATCGAGGACGAGCTTTTGATCCGCTTGTCGCAGCTGTAATTGAGGATGACCTTGTATCCTGCAACAGAACGTTCGAAGTCCTAAGCTCCACCGGCAAGAGAGTCACACGCAATCCACCGGAACCATTGAACACTGTTGAGCTCCAGAAGCGTGCTTGTCGGGTCACACGCGCAAGTCCGCATCAAGTATTACAGTGGGCTGAGGAGCTGTACCAGTCAGGGTATATCTCATATCCGCGTACGGAGACGAACAAATACCCAAGCACCTTCGACTTGAACGCCATCACACATGAGCTCACAAATCACGGCCACTTTGGGCAGTATGCGCATTCCCTACTCAGCCAAGGCCTATCGCGACCGCGTGCTGGAAATCAGGACGACGGAGCTCACCCTCCCATCTATCCCGCAAAGCACATTGATCCAAATTCAATTGGAGGGCAAAGTAATGGCAAGTATCTTGTGTACGAGCTCGTCGCGCGACACTTTCTTGCAACTGTATCTCCGCTAGCGGTTGGCCGGTCGACTGAAGTTAACGTGCAATGTGCGAGCGAGACCTTTACAGCGAAGGGCTTATGCATTGAGCGACATGGCTATTTGGATGTTTATGGCCCGAGCTCACAATTCAGTGTCTCATTCGATCGTTGGTCAGGCTCCGGTGATCTGCCACGGAAGTACACGCAAGGTGAGGTGCTGCAGGCGACACGAGTAAGCTTAGAGGAGGGAAAAACAGAACCACCAGCGCTACTCACCGAGCCTGAGCTCATCTCAGCCATGGATCGAGCGCAAATTGGCACAGATGCTACGCAAGCTGCACATATCGAGAAGGTTGTTGGAGAGCGCGGATATGCGGAGAGGACCGCAGGTGACCGCTTGAAGCCAACAAACCTCGGAGAAGCCCTGGCGTACGGCTATAAGCAGATAGGCCTGCATGAGGTATGGCGCCCGGATTTCCGAGCAAAGATGGAAGCGCAGGTGAATAGCATCGCAACAAATCAGTCTACGTCGCACCCGCAGTGGCATGACGTCCTGCAAAACCTTCTCAGTGAGAGTGTGACGCAATACAGCACGGCATCCGCGGGAAAACAGCAGCTTGAGTCGTCCTTGACAGCTTTACTTGGGCAGGCGAGCAGAAGTGCTCAGCCGACATCCTTCAGTCTTGGGCTATGTCCATCTGGATGTCGGGATGAGATATCCGTTCGACGTGAGCGTGACGGAACGTGGAGAGTTGCGTGCGCTTGTCGACCACGTAACAAAGATTTGGAACTTGAACGATTGCCAAAGGTAGCCGGAAACTTGTGTGCATCCGCAAATGTGTGTCAGCAGCCGACGTGCACCGCTGTTGGCAGCCTCAACTTGCTGCACTTTAGCCTGCCCGCTGAGGTGCTTCACCCAAACGAGTCGCGATATGCTGCTGGTGTCGACCTTTGCGTCTAG
PROTEIN sequence
Length: 554
LAHANSQPSASSCSAGGSTRRTRLRTFGASNSSTRLLLVISWSLLIHSVLRLPYPLRHCTRCCRPAGCQGTAYFNWDRGRAFDPLVAAVIEDDLVSCNRTFEVLSSTGKRVTRNPPEPLNTVELQKRACRVTRASPHQVLQWAEELYQSGYISYPRTETNKYPSTFDLNAITHELTNHGHFGQYAHSLLSQGLSRPRAGNQDDGAHPPIYPAKHIDPNSIGGQSNGKYLVYELVARHFLATVSPLAVGRSTEVNVQCASETFTAKGLCIERHGYLDVYGPSSQFSVSFDRWSGSGDLPRKYTQGEVLQATRVSLEEGKTEPPALLTEPELISAMDRAQIGTDATQAAHIEKVVGERGYAERTAGDRLKPTNLGEALAYGYKQIGLHEVWRPDFRAKMEAQVNSIATNQSTSHPQWHDVLQNLLSESVTQYSTASAGKQQLESSLTALLGQASRSAQPTSFSLGLCPSGCRDEISVRRERDGTWRVACACRPRNKDLELERLPKVAGNLCASANVCQQPTCTAVGSLNLLHFSLPAEVLHPNESRYAAGVDLCV*