ggKbase home page

sw_10_scaffold_8743_2

Organism: SW_10_Chlorophyta_55_6

partial RP 13 / 55 MC: 4 BSCG 9 / 51 MC: 3 ASCG 8 / 38
Location: 1886..2281

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=2669954 bin=GWA1_ZB2_49_26 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 132.0
  • Bit_score: 151
  • Evalue 7.70e-34
RNA polymerase sigma factor RpoD, RNA polymerase primary sigma factor {ECO:0000313|EMBL:KKU92789.1}; TaxID=1619027 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 132.0
  • Bit_score: 151
  • Evalue 1.10e-33
sigA; RNA polymerase major sigma-43 factor (sigma-A) similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 129.0
  • Bit_score: 129
  • Evalue 5.20e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC1_OD1_48_11 → Yanofskybacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGCAGCTTGAAGAGGATGTAGAAGGCGTCGATCGTCTCTACGAAGAGCTCAGTAAGAGCGGAATTAAAGTCATACAGGATATGGAATTTTTGCCGAATGTTGGAGAAGAATCTGCCTCTGAAGAATCTCGATCAAGCGAGCCGGAAGAAGAGCAAAGTCCGGACCCGGTGCAAATTTATTTAAAGCAGATCGGAGATATCGATCTTTTAACCAAAGAGCAAGAAGCAGAGCTTTCCAAGCGTGTCATGGAAGGAGACGAGCAAGCCAAGCAGGAACTTGCGGAGGCGAACTTGCGTTTGGTGGTAAGCATCGCCAAAAAATACGTAGGCCGCAGTCCGAATCTTACGCTCCTGGATTTAATTCAGGAAGGAAACATCGGACTGTATAAGGCGATC
PROTEIN sequence
Length: 132
MQLEEDVEGVDRLYEELSKSGIKVIQDMEFLPNVGEESASEESRSSEPEEEQSPDPVQIYLKQIGDIDLLTKEQEAELSKRVMEGDEQAKQELAEANLRLVVSIAKKYVGRSPNLTLLDLIQEGNIGLYKAI