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SW_10_Chlorophyta_55_6

In projects: SW_10

Consensus taxonomy: Chlorophyta → Viridiplantae

Taxonomy override: Eukaryote

Metagenomic Context

Parent: SW_10_UNK

Properties

Avg. coverage: 6.08 Longest contig: 7.50 Kbp Bin length: 1.16 Mbp GC content: 54.51 %

Contigs count: 662 Features count: 1220 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 13 / 55 MC: 4 BSCG 9 / 51 MC: 3 ASCG 8 / 38

Displaying items 651-662 of 662 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
sw_10_scaffold_15091 Species: Tetraselmis sp. GSL018 (80%)	5	1222 bp	51.31	5.48	90.10
sw_10_scaffold_1743 Phylum: Chlorophyta (60%)	5	4726 bp	56.81	7.70	63.67
sw_10_scaffold_3986 Genus: Micromonas (60%)	5	3379 bp	53.18	6.36	86.39
sw_10_scaffold_5615 Phylum: Chlorophyta (60%)	5	2841 bp	50.40	5.49	95.14
sw_10_scaffold_7008 Phylum: Chlorophyta (80%)	5	5254 bp	51.24	6.38	94.61
sw_10_scaffold_3678 Order: Mamiellales (60%)	5	3845 bp	53.26	6.22	88.56
sw_10_scaffold_5212 Genus: Ostreococcus (60%)	5	3283 bp	50.72	5.88	87.18
sw_10_scaffold_12783 Order: Mamiellales (50%)	6	2574 bp	54.43	5.01	82.87
sw_10_scaffold_3766 Class: Trebouxiophyceae (50%)	6	2960 bp	49.19	6.01	83.31
sw_10_scaffold_3152 Order: Mamiellales (50%)	6	3283 bp	50.59	5.33	93.85
sw_10_scaffold_8321 Phylum: Chlorophyta (50%)	6	3012 bp	50.80	5.84	83.96
sw_10_scaffold_5234 Phylum: Chlorophyta (71.43%)	7	4464 bp	53.18	6.70	67.27

Displaying items 651-662 of 662 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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