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sw_11_scaffold_3

Search features with annotation key words

Displaying items 91-120 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_3_90
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(87093..87413)
DNA (321bp) protein (107aa)
tRNA-binding protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y300_9EURY
tRNA-binding protein {ECO:0000313|EMBL:ELY68036.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
EMAP domain-containing protein
sw_11_scaffold_3_91
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(87581..88156)
DNA (576bp) protein (192aa)
50S ribosomal protein L15e n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AIN6_NATGS
ribosomal protein L15E
50S ribosomal protein L15e {ECO:0000256|HAMAP-Rule:MF_00256}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium greg
sw_11_scaffold_3_92
unknown

Not on your lists

88562..88732
DNA (171bp) protein (57aa)

This feature has no annotations

sw_11_scaffold_3_93
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

88873..89631
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VZL7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47098.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
sw_11_scaffold_3_94

Not on your lists

comp(89642..90910)
DNA (1269bp) protein (423aa)
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=uncultured archaeon A07HB70 RepID=V4XHD6_9ARCH
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:ESS07609.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_11_scaffold_3_95
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(91108..91527)
DNA (420bp) protein (140aa)
Putative F420-dependent enzyme n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXV5_9EURY
Putative F420-dependent enzyme {ECO:0000313|EMBL:EMA38422.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
pyridoxamine 5'-phosphate oxidase-related FMN-binding
sw_11_scaffold_3_96
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

91790..92461
DNA (672bp) protein (224aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EBI3_9EURY
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:ELZ44398.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum c
hypothetical protein
sw_11_scaffold_3_97
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(92470..92856)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037AE5B5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47754.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_11_scaffold_3_98
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(93273..93605)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y4V4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY68757.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
sw_11_scaffold_3_99
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

93829..95088
DNA (1260bp) protein (420aa)
Ferredoxin--NAD(+) reductase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LYZ2_9EURY
Ferredoxin--NAD(+) reductase {ECO:0000313|EMBL:EMA37554.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
sw_11_scaffold_3_100
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(94967..96907)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEH3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58366.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
HTR-like protein
sw_11_scaffold_3_101
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

97221..97634
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TXA4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23545.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_11_scaffold_3_102
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(97789..99171)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAX1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41520.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_11_scaffold_3_103

Not on your lists

99365..100066
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YEH3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11451.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_11_scaffold_3_104
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

100665..101576
DNA (912bp) protein (304aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384};; TaxID=79
Homoserine kinase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D7X1_HALXS
Homoserine kinase
sw_11_scaffold_3_105
unknown

Not on your lists

101573..101965
DNA (393bp) protein (131aa)

This feature has no annotations

sw_11_scaffold_3_106
unknown

Not on your lists

102006..102542
DNA (537bp) protein (179aa)

This feature has no annotations

sw_11_scaffold_3_107
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(102562..103476)
DNA (915bp) protein (305aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJX5_9EURY
pyridoxal biosynthesis lyase PdxS
sw_11_scaffold_3_108
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

103696..104472
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPB6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW94032.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_11_scaffold_3_109
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(105228..108005)
DNA (2778bp) protein (926aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02005}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02005};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02005}; TaxID=1333523 species="Archaea; Euryarcha
valS; valyl-tRNA ligase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4WAD1_9EURY
sw_11_scaffold_3_110
unknown

Not on your lists

comp(108257..108946)
DNA (690bp) protein (230aa)

This feature has no annotations

sw_11_scaffold_3_111
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

109162..109992
DNA (831bp) protein (277aa)
Regulatory protein ArsR n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7BMH6_NATSJ
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AHG00244.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola l
sw_11_scaffold_3_112
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

110128..111555
DNA (1428bp) protein (476aa)
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020821}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020820};; TaxID=543526 species="Archaea; Euryarch
DNA primase DnaG n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RZT1_HALTV
TOPRIM domain protein
sw_11_scaffold_3_113
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(111552..112094)
DNA (543bp) protein (181aa)
Acetyltransferase n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0ILZ7_9EURY
Acetyltransferase {ECO:0000313|EMBL:ELZ96883.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;"
sw_11_scaffold_3_114
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(112096..113493)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KFC5_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA18899.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
sw_11_scaffold_3_115
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

113724..114332
DNA (609bp) protein (203aa)
Tritrans,polycis-undecaprenyl-diphosphate synthase n=1 Tax=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) RepID=B0R6C5_HALS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAG20003.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
sw_11_scaffold_3_116
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(114345..115277)
DNA (933bp) protein (311aa)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IFQ0_HALRX
undecaprenyl diphosphate synthase
sw_11_scaffold_3_117
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(115397..116365)
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IG49_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05367.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_11_scaffold_3_118
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(116446..117282)
DNA (837bp) protein (279aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFM5_9EURY
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EMA44178.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
sw_11_scaffold_3_119
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

117426..117725
DNA (300bp) protein (100aa)
Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=Halonotius sp. J07HN4 RepID=U1QJ64_9EURY
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:ERH06943.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halo
AbrB family transcription regulator
Displaying items 91-120 of 156 in total

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