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sw_11_scaffold_11234_1

Organism: SW_11_UNK

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Location: comp(3..1211)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 323.0
  • Bit_score: 544
  • Evalue 1.70e-151
tRNA-splicing ligase RtcB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMZ0_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 323.0
  • Bit_score: 544
  • Evalue 1.20e-151
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 322.0
  • Bit_score: 534
  • Evalue 3.60e-149

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1209
GTGTATGATATCGGCGTCGAGCATGCTGCCCACAACTTCGTCGCCAACGGCTTCGTCGTATCGAACTGCGGCGTCCGGATGATGCGGACGGACCTCCGATACGACGACGTCCGTGGCCGCGAGGAGGAGCTCGTCGATGCCCTGTTCGACGTCATTCCATCAGGTCTGGGCAAGGGCGGCGTCGTCGAGTCCACCGTGGAGGCGGTGGATGCCATTCTTGACCGCGGCATGGACTGGGCGCTCGAGCAGGGCTACGGCTTCCCCGTCGGCGGCGTGGCCGGTATCGATGCTGAGGACGGTTGCATTTCCCCCGGTGCGGTCGGCTACGACATCAATTGTGGTGTTAGATTGATACGTTCAAATCTAACTTACAATGACATACGTGGAAGGGAAGAAGAGCTTGTCGATGCCTTATTTAATGTAATTCCATCAGGTCTAGGGAAAGGGGGCGTCGTCGAATCGAGTGTCGAAACCGTCGAGGCCATCCTCGACCGAGGAATGGACTGGGCGCTCGAGGCTGGCTATGCCGTGCCCGAGGATCTCGAACACTGTGAGGACGAGGGCGTGCGCCGAGAGTCGGACCCTTCGAAGGTTTCTCATGAGGCTAAACAACGAGGGAAGAACCAGATCGGCTCACTTGGGTCGGGGAACCATTTCCTCGAGGTCCAGCGGGTGACCGACATCTACCTTGATAACGTCGCCGCGGATTTCGGCCTCGAGGAGGACCAGATCGTGGTGCTCATTCACTGTGGCTCCCGGGGGCTCGGCCACCAGACCTGCACGGACTATCTCCGGAAGATCGAACAGACCCACGCCGGGCTGTTGGCGCAGCTCCCGGACAAGGAACTTGCGGCAGCGCCGGCGGGCTCACAACTCGCTGAGGACTACTACCAGGCGATGGGCGCCGGAATCAACTTCGCCTGGGTGAACCGGCAGTTGGTGATGCATGGCGTCCGCGAGGTCTTCGAGGACGTCTTCGATCGGGATTGGCAGGCCATGGGGCTCCACCTGCTCTACGACGTGGCCCACAACATCGCGAAGAAGGAGATCCACACCGTCGATGGCGAGGAACGCGAGCTGTTCGTCCACCGCAAGGGCGCCACCCGAGCGTTCCCCGCGGGCCGCCCCGAGGTGCCTCGGGCGTATGCCGACGTCGGGCAGCCGATCATCATTCCGGGTTCGATGGGGGCGGGGGGCTACGTGCTCCGC
PROTEIN sequence
Length: 403
VYDIGVEHAAHNFVANGFVVSNCGVRMMRTDLRYDDVRGREEELVDALFDVIPSGLGKGGVVESTVEAVDAILDRGMDWALEQGYGFPVGGVAGIDAEDGCISPGAVGYDINCGVRLIRSNLTYNDIRGREEELVDALFNVIPSGLGKGGVVESSVETVEAILDRGMDWALEAGYAVPEDLEHCEDEGVRRESDPSKVSHEAKQRGKNQIGSLGSGNHFLEVQRVTDIYLDNVAADFGLEEDQIVVLIHCGSRGLGHQTCTDYLRKIEQTHAGLLAQLPDKELAAAPAGSQLAEDYYQAMGAGINFAWVNRQLVMHGVREVFEDVFDRDWQAMGLHLLYDVAHNIAKKEIHTVDGEERELFVHRKGATRAFPAGRPEVPRAYADVGQPIIIPGSMGAGGYVLR