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sw_11_scaffold_12211_1

Organism: SW_11_UNK

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Location: comp(1..783)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; PEP {ECO:0000256|HAMAP-Rule:MF_01321}; Plastid-encoded RNA polymerase subunit similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 186.0
  • Bit_score: 163
  • Evalue 4.20e-37
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 206.0
  • Bit_score: 155
  • Evalue 3.00e-35
DNA-directed RNA polymerase subunit beta n=1 Tax=Oltmannsiellopsis viridis RepID=RPOB_OLTVI similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 205.0
  • Bit_score: 163
  • Evalue 3.00e-37

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Taxonomy

Interfilum terricola → Interfilum → Klebsormidiales → Klebsormidiophyceae → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 783
ATGAGTAAGGTTGATTTTAATAAGCTTAAAAACCTTGGTGTGTATACAAGCGCTATGAAAAAAGATACATCACAAAATGCCATTGCTTACCACCCTGGTTTAACTAGCGGCGTATTCACCCCATTAAAAAAGGTAAGCAAAACCGATACACACAAGCATATATTTAGGCGTAAAGTAAGCAGGTATGAACAAAATGCGAATTACAATGATTTGGGCTTAGGTCAAAAAGCAGTTTGCACTCACATAACACAAAAGATTACCTCGAATAACGATACTATACACTACTTAAAGCGATTTGATCAATTTGGAATTATAAAACCAGGGTGTGTAGTGCAACAAGGTGATATACTTGTACGCAAGTGTAACACAAAGTTTCACTCTAATAAGATGCCCGAAGAACAACTGCTTTACGACATTTTTACTTCACACAGTACAAGTATACAAGATACGCAAATGCAAGAAGATACTTCTTTCGTTTTATCTGATGACATACATGCGCGTATATTGCAAACATTTTATTTCCCTGAAGTAAAGGCGCAAAACAAATACAAAGGTAGTGTTATAATCTATTTCATTATAAAACGTCGTATTCAGATAGGAGATAAACTTGCTGGTAGACATGGAAATAAAGGTATCGTTTGTAACATTGTACCAAAACATGATATGCCTTACATATCTGATGGCACAACTCTTGATATTGTATTAAATCCATTGGGTGTACCATCTAGGATGAATGTAGGTCAAGTGTACGAATGCCTTTTAGGTATGGCAGGTAAGTATTTA
PROTEIN sequence
Length: 261
MSKVDFNKLKNLGVYTSAMKKDTSQNAIAYHPGLTSGVFTPLKKVSKTDTHKHIFRRKVSRYEQNANYNDLGLGQKAVCTHITQKITSNNDTIHYLKRFDQFGIIKPGCVVQQGDILVRKCNTKFHSNKMPEEQLLYDIFTSHSTSIQDTQMQEDTSFVLSDDIHARILQTFYFPEVKAQNKYKGSVIIYFIIKRRIQIGDKLAGRHGNKGIVCNIVPKHDMPYISDGTTLDIVLNPLGVPSRMNVGQVYECLLGMAGKYL