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sw_11_scaffold_14240_1

Organism: SW_11_UNK

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Location: comp(2..505)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A7017 similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 169.0
  • Bit_score: 193
  • Evalue 2.20e-46
RNA polymerase sigma factor SigW {ECO:0000313|EMBL:GAO28231.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum J similarity UNIPROT
DB: UniProtKB
  • Identity: 53.0
  • Coverage: 168.0
  • Bit_score: 190
  • Evalue 2.70e-45
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 171.0
  • Bit_score: 174
  • Evalue 2.30e-41

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Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 504
TTGGAAGTGAGCGATACACAGTCGGATAGTGCCCGGGAAGATCAGCAATTAGTGCAAAAAGCCCAGGAAGGGGATCAGGATGCCTTTTCAGAACTGATGAGCAAATACAGGGACTCCATATTCTATATGGTCCTGAAAATGGTCAATAGCCGCAACGATGCAGAGGACTTGACGATGGAGTCGTTTGCCAAAGCTTTTAATAATCTGAAACGGTACGATTTCAAATACGCTTTCAGTACCTGGCTTTTTAAGATTGCTACGAATAATAGCATCGACTTTATCCGTAAGAAGAAGCTCGATACGCATTCCATTGATGAACCCATCAAAACCGATAAAGGGGAAATCCACTCGGTCAATATCAAAACGGAACATCCTGACCCTGAGCAGAAAGTGGAGAGAGGGGAGAGGATCGTATCGGTTCGCTCGGCCGTTAAAAAACTCAAGGATAAATATCGCACTCTGATCGAGTTACGCTATTACGAAGAGCTATCCTACGATGAGATA
PROTEIN sequence
Length: 168
LEVSDTQSDSAREDQQLVQKAQEGDQDAFSELMSKYRDSIFYMVLKMVNSRNDAEDLTMESFAKAFNNLKRYDFKYAFSTWLFKIATNNSIDFIRKKKLDTHSIDEPIKTDKGEIHSVNIKTEHPDPEQKVERGERIVSVRSAVKKLKDKYRTLIELRYYEELSYDEI