ggKbase home page

sw_11_scaffold_4173_1

Organism: SW_11_UNK

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Location: comp(1..2601)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 908.0
  • Bit_score: 705
  • Evalue 2.00e-200
DNA-directed RNA polymerase subunit A'; EC=2.7.7.6;; Contains:; Mja rpoA1 intein; Mja rpol A' intein; TaxID=243232 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 908.0
  • Bit_score: 705
  • Evalue 9.80e-200
DNA-directed RNA polymerase subunit A' n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RPOA1_METJA similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 908.0
  • Bit_score: 705
  • Evalue 6.90e-200

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanocaldococcus jannaschii → Methanocaldococcus → Methanococcales → Methanococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 2601
GGCGCCCCGCAACTCATCATCGAGGACCTCTGGGAACTCCTCCAGTACCACGTCACCACGTTTATGGACAACGAAATCTCGGGCACGCCCCCGGCCCGGCACCGCTCGGGCCGGCCGCTGAAGACCCTCTCCCAGCGCCTGAAGGGCAAGGAGGGTCGGTTCCGCGGGTCGCTTTCGGGCAAGCGCGTGAACTTCTCTGCCCGGACGGTCATCTCGCCCGACCCCACCCTCTCGCTGAACGAGGTTGGCGTCCCCGAACGGGTGGCGACGGAGATGACCCAGACGATGAACGTCAACGAGCGCAACCTCCAGAAGGCACGCCGCTACGTCGCCAACGGGCCCGAGGCACACCCGGGCGCCAACTACGTGCGTCGCCACGACGGCCGCCGGCTGAAGGTCACCGAGAAGAACTGCGAGGAACTCGCCGAGAAGGTCGAACCGGGCTGGGAAGTCTCCCGGCACCTCATCGACGGCGACGTCGTCATCTTCAACCGCCAGCCCTCGCTGCACCGCATGTCCATCATGGCCCACGAGGTGGTCGTGATGCCCTACAAGACCTTCCGGCTCAATACGGTCGTGTGTGTCGCCGGTGACACGACGGTCGACTGTGGTGGATACAGTCGCCGTATCGAGGATATCGAGGACGACTGGGACGAAGAAGTCCTCACGACGTACGATCCCGAGGCCGGCGAGACACGACCGACCGGACTGCAGGACTTCTGGGCACTCGACCCTGCCGAGTATGGTGCGACAGTCCACGAAATCGAGACCGAGTTCGGGTCCGTCGTTGCGACGTCCGACCATCCGTTCGAGACGCCGGACGGGCCGGTTCCAGTCGAGGAACTCGAACCCGGTGACCGCATCCTCCGCCGACCGATCGACCTCCCCGAGTTCGACCCGGGTGCTGACGAACAGGTCGTCGTGACCGAGGACGACATCGAAGCGGCGGCCCCCGATGCGACGTACCTCGGACACGCAATGCGAACGCTCGACAATCTCGTTCCCTTCGACGCATACTCCCGGGAAGGCGTCGCGGCTGCACGGCTGGTCGGTCATTTGTTCGGCGACGGAACGCTGGATTTGAACGGACAGACCGGTCGGCTGTTCTTCCGGGCCGCCGAGGAAGACCTCGACCGTATCCGGGACGATCTTGAACTGCTCGGGTTCGAACCCGAGGAACCAGTGGTGAAAGAAAACACCGCCGAGATCGTCGCTGCCGACGGCGGATCGACGACAGTCAGTGGAAGCGGCTGGTCGATGAAACTCGGCAGCAAACCGTTGTCGTCGTTCATGGCCGCACTCGGCGCGCCGGTCGGCGATAAAGTCGAGACCGACCGGACAGTCCCAGACTGGATTCTGGAGGGGCCGACGGCAGTCAAGCGTGCGTTCCTGAGTGCCTACTTCGGCGCAGAACTGAGCACTCCCTGCTATCGCGGCCACAAGCTGTTCAGGCAGCCGGTCTTCAAACTCTCACGAATCAAAAGTGTTCTCGAGGCCGGAAAACAATTCGTCGAAGAAATCGACGCACTACTCGAACAGTTCGACAGCGGTGTCTCGAATATCCGGATTCGACCGAGAAATCGTCGCTCGGATGGATCGATCTCACAGCAGGTTACTGCCGAACTGGAGGCCAGTTCTGCGTCTCTGGAAGCACTCTTCGGTCGTGTCGGGTACACGTACAACGCAGACGCAGACGCTGAAGCGCGGCTGGCGTACGCCTATCTGTCGGAAAAACCGTCAGGCAAGTTTGCTGTCGAGGAGTATCCTGATTACGAAGAGTGGAAAACACACCGCGTTGCCGACGGGCAAGAGGGATTGATCCGTGACGCTATCGTCGATATCAGAGACGCTGACCACCAGGTAGTCTACGACGTGACGACCACTGACGAGACGCACAAGTTTATTTCAGAAAATCTCGTGTGTAATAATTGTCCGCCGTACAACGCCGACTTCGACGGCGACGAGATGAACATGCACGCCCTCCAGAACGAGGAGGCCCGCGCCGAGGCCCGGGTGCTGATGCGCGTCCAGGAACAGATGCTCAGCCCGCGGTTCGGCGAGAACATCCTCGGGGCCATCCAGGACCACGTCACCGGAACCTACCTCCTGACCAACAAGAACCCCCGGTTCAACGAGACGCAGGCGCTTGACCTGTTGCGGGCGACCCGCATCGACGAACTCCCAGAGCCCGACGGGGAGGAGGCCGGGGAGGCCTACTGGACCGGTCGGACCATCTTCTCTGAGCTGCTCCCGGGGGAGCTGAACCTCGAGTTCACCTCCTCGGCGGGCGACACGGTGGTCATCGAGGACGGGCAACTGGTCGACGGCACCGTCGACGAGGACGCCGTGGGCGCCTTCGGCGGCGAAATCGTCGACACCGTCGCGAAGGCGTACTCGAAAACGCGGGCGCGAATCTTCATCAACGAGGTCTCGTCGCTGGCGGTGCGGACGATAATGCACTTCGGGTTCTCTATCGGCATCGACGACGAGTCGATCCCGCCCGAGGCCCAGGCCCAGGTCGACGAGGCCATCGACAACGCGAACGAGCGCGTCGAGGAACTCATCGAGACCTACCGGCGGGGTGAACTCGAGTCCCTGCCC
PROTEIN sequence
Length: 867
GAPQLIIEDLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPERVATEMTQTMNVNERNLQKARRYVANGPEAHPGANYVRRHDGRRLKVTEKNCEELAEKVEPGWEVSRHLIDGDVVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTVVCVAGDTTVDCGGYSRRIEDIEDDWDEEVLTTYDPEAGETRPTGLQDFWALDPAEYGATVHEIETEFGSVVATSDHPFETPDGPVPVEELEPGDRILRRPIDLPEFDPGADEQVVVTEDDIEAAAPDATYLGHAMRTLDNLVPFDAYSREGVAAARLVGHLFGDGTLDLNGQTGRLFFRAAEEDLDRIRDDLELLGFEPEEPVVKENTAEIVAADGGSTTVSGSGWSMKLGSKPLSSFMAALGAPVGDKVETDRTVPDWILEGPTAVKRAFLSAYFGAELSTPCYRGHKLFRQPVFKLSRIKSVLEAGKQFVEEIDALLEQFDSGVSNIRIRPRNRRSDGSISQQVTAELEASSASLEALFGRVGYTYNADADAEARLAYAYLSEKPSGKFAVEEYPDYEEWKTHRVADGQEGLIRDAIVDIRDADHQVVYDVTTTDETHKFISENLVCNNCPPYNADFDGDEMNMHALQNEEARAEARVLMRVQEQMLSPRFGENILGAIQDHVTGTYLLTNKNPRFNETQALDLLRATRIDELPEPDGEEAGEAYWTGRTIFSELLPGELNLEFTSSAGDTVVIEDGQLVDGTVDEDAVGAFGGEIVDTVAKAYSKTRARIFINEVSSLAVRTIMHFGFSIGIDDESIPPEAQAQVDEAIDNANERVEELIETYRRGELESLP