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sw_11_scaffold_557_7

Organism: SW_11_UNK

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Location: 6033..6659

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1Y7_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 26.0
  • Coverage: 196.0
  • Bit_score: 72
  • Evalue 7.20e-10
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 26.0
  • Coverage: 196.0
  • Bit_score: 72
  • Evalue 2.00e-10
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:KIA90265.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobact similarity UNIPROT
DB: UniProtKB
  • Identity: 22.5
  • Coverage: 191.0
  • Bit_score: 72
  • Evalue 7.70e-10

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Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 627
ATGGATCGAGAAGAACATAGTAACTCCGGTATTGAAAGCAACTATGTCAAAGGTGACAATAACGCCATTACGCAACTTTACGATGCTTATTTCAGGGAATTTTATAGATGGTGTTGGAAGCACCAAATCAAATTAACGGATGATGAAATTAACGGTATTTATACAGATGCCATCATGATATTCCGGGACAAAGCTTGGTCTGGCGAGTTGGAGAATTATCATTTTTGTAGCGATAAAACAATTCTTTTTTCAATAGCCAAAAAACTGATCCAGAAGCAATTTTCATCAAAGAAAAACAGCCAGGAGAAAATTGACAATTTTTTAAACACATACGGAGAAGATCAGCAGATTAGTGAGGAAATCGATCGCTCATTGCAGGAAATTTCATTAGAAGGAGATAACAAGTGGCCATCGCTGGACTTGAGCGAACACAAAAAATTGCAGGCAATCTTTGCTGAATTATCAGAAAAATGCAAGAATATTTTCATGTACTGTTTTGCATATGAATTACCAACACATGAAGTGGTTGCTAAGCTTGCCTACAGCAGTGAGGACAGCTTAAAAACCCAGAAATACAAATGCATGAAAAAAGTGAAAAGATTAATAGGTCAACATCAAGAGAAGTGA
PROTEIN sequence
Length: 209
MDREEHSNSGIESNYVKGDNNAITQLYDAYFREFYRWCWKHQIKLTDDEINGIYTDAIMIFRDKAWSGELENYHFCSDKTILFSIAKKLIQKQFSSKKNSQEKIDNFLNTYGEDQQISEEIDRSLQEISLEGDNKWPSLDLSEHKKLQAIFAELSEKCKNIFMYCFAYELPTHEVVAKLAYSSEDSLKTQKYKCMKKVKRLIGQHQEK*