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sw_11_scaffold_677_14

Organism: SW_11_UNK

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Location: 7017..8183

Top 3 Functional Annotations

Value Algorithm Source
NMD3 family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJ48_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 372.0
  • Bit_score: 515
  • Evalue 4.60e-143
nonsense mediated mRNA decay-like protein similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 372.0
  • Bit_score: 515
  • Evalue 1.30e-143
NMD3 family protein {ECO:0000313|EMBL:ERJ06848.1}; Nonsense mediated mRNA decay-like protein {ECO:0000313|EMBL:CCQ33013.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 372.0
  • Bit_score: 515
  • Evalue 6.40e-143

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Taxonomy

Halorhabdus tiamatea → Halorhabdus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1167
ATGGAAACGGCGAACTTACAAGCGTCAGTCGTCTACGGGCGGGCAGTGAGTCGATCAGGCGAGTTCTGTCCGCGGTGCGGCGATCCCATCGAGCGGTCCACGGAGAGCCCCGACTGGGAGACCGACCGCGACCAGTCGCTGTGCGACGCCTGCTACGTCGACGAGTACGACCTGATCGACGCGCCCGACCGCGTCGAGATCCGCGTCTGCTCGCAGTGTGGCGCCGTCCACCGCGGCAACCGGTGGATCGACGTCGGTGCGGAGGACTACACTGACGTCGCCATCGAGGCGGTGACCGAGACGCTGAGCGTCCACGTCGCCGCCGAGGACGTCTCCTGGCAGGTCGCCCCGGAACAGGTCGACGCGACGACGATCCGGATGCACTGCCAGTTTACGGGCATCCTCCGCGGGACGCCGGTCGCCGAGGAGGTCACCGTCCCGGTGAAGATCAGCCGCCAAACCTGTACACGCTGTGGCCGGATCGCTGGCGGATCGTACGCCAGCGTCGTCCAGGTCCGGGCCCGGGACCGCGAGCCGGACGACGACGAAACCGAGCGGGCGACGGAGATCGCCCACGAGCGCGTCACCGAACTCGAAGCCAACGGGGACCGGGAGGCGTTCGTCAGCGAGATCAACGAGGTCGAAGGCGGGCTGGACCTGCGCCTCTCGACGAACCGCCTCGGCGAACAGGTCGCCCGCCAGCTCGTCGAGGAGTTCGGCGGCGCCTACAGCGACCACGAGACGCTCGTGACCGAGGACGGCGACGGCAACGAGGTGTACCGTGTGACCTACGCTGTCCACCTGCCGCCGTATCACCCCGGCGAGGTGATCGACCCTGAAGACGACGACGGCCCGGCGCTGGTCGAGAGCAGCCGCGGCCAGCTCCGTGGCACCCGCCTCCGCACCGGCGAGGAGTACGTCGCGGCGTTCGAGGACGGCGACGCCCCCGAGGCCGAGCGGCTGGGGTGGTACGACGAGGGCGAGGAGACGTCACTGGTCGCCGTCGTCGACGAGCACGCCGTCCAGGTGCTCGACCCCGAATCCTACGAAACCGAGACGATTGCCCGCCCGGAGTATCTCGATACGGACTCCGACACCGTCCGGGTGCTGCGCAGCGACGCCGGACTGTTCGTGCTGCCGGAGACTGCCCCGGCGAACGCACGGTAG
PROTEIN sequence
Length: 389
METANLQASVVYGRAVSRSGEFCPRCGDPIERSTESPDWETDRDQSLCDACYVDEYDLIDAPDRVEIRVCSQCGAVHRGNRWIDVGAEDYTDVAIEAVTETLSVHVAAEDVSWQVAPEQVDATTIRMHCQFTGILRGTPVAEEVTVPVKISRQTCTRCGRIAGGSYASVVQVRARDREPDDDETERATEIAHERVTELEANGDREAFVSEINEVEGGLDLRLSTNRLGEQVARQLVEEFGGAYSDHETLVTEDGDGNEVYRVTYAVHLPPYHPGEVIDPEDDDGPALVESSRGQLRGTRLRTGEEYVAAFEDGDAPEAERLGWYDEGEETSLVAVVDEHAVQVLDPESYETETIARPEYLDTDSDTVRVLRSDAGLFVLPETAPANAR*