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SW_11_UNK

In projects: SW_11  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 18.10 Longest contig: 206.16 Kbp Bin length: 36.83 Mbp GC content: 60.58 %
Contigs count: 13823 Features count: 48125 rRNAs count: 12 tRNAs count: 554

Genome completeness

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Displaying items 1-50 of 13823 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_11_scaffold_14754 2 1070 bp 54.95 6.64 118.04
sw_11_scaffold_13351
Species: Natronomonas pharaonis (50%)
2 1153 bp 67.74 28.62 115.79
sw_11_scaffold_31114
Species: Halorhabdus utahensis (50%)
2 1063 bp 67.73 9.60 114.86
sw_11_scaffold_21874
Species: Draconibacterium sp. JN14CK-3 (50%)
2 1168 bp 68.41 6.85 113.27
sw_11_scaffold_24058
Species: Haloquadratum sp. J07HQX50 (50%)
2 1085 bp 58.71 7.93 113.09
sw_11_scaffold_14291 2 1096 bp 61.31 8.58 113.05
sw_11_scaffold_24669
Species: Haloarcula vallismortis (50%)
2 1272 bp 70.60 11.32 112.26
sw_11_scaffold_17904
Species: Spirosoma linguale (50%)
2 1539 bp 65.24 8.64 111.70
sw_11_scaffold_15602
Species: Haladaptatus paucihalophilus (50%)
2 1026 bp 63.74 16.37 111.70
sw_11_scaffold_11586
Species: Salinibacter ruber (50%)
2 1275 bp 57.41 8.39 111.53
sw_11_scaffold_13307
Species: Halorubrum saccharovorum (50%)
2 1156 bp 56.83 8.56 111.07
sw_11_scaffold_20519
Species: Natronomonas moolapensis (50%)
2 1320 bp 75.53 29.85 110.91
sw_11_scaffold_21444
Species: Halosimplex carlsbadense (100%)
2 1493 bp 66.91 11.25 110.32
sw_11_scaffold_17948
Species: Halosimplex carlsbadense (50%)
2 1310 bp 73.59 17.86 110.15
sw_11_scaffold_19848
Species: Halococcus thailandensis (50%)
2 1568 bp 52.55 5.17 109.82
sw_11_scaffold_8636 3 1580 bp 68.92 62.53 108.80
sw_11_scaffold_20079
Species: Haloterrigena turkmenica (50%)
2 1478 bp 69.55 19.55 108.39
sw_11_scaffold_12591
Species: Halorubrum sp. J07HR59 (50%)
2 1202 bp 44.01 6.32 107.82
sw_11_scaffold_9848
Species: Salinibacter ruber (100%)
2 2044 bp 68.54 58.32 107.58
sw_11_scaffold_28067
Species: Salinibacter ruber (66.67%)
3 1449 bp 63.29 11.73 107.04
sw_11_scaffold_15282
Species: CG_Woesearch_01 (50%)
2 1566 bp 49.30 6.45 106.90
sw_11_scaffold_11573
Species: Halobacterium sp. DL1 (50%)
2 1276 bp 74.61 22.34 106.51
sw_11_scaffold_13432
Order: Halobacteriales (66.67%)
3 1148 bp 56.71 5.31 106.36
sw_11_scaffold_12724 3 1194 bp 70.18 8.96 106.28
sw_11_scaffold_8810
Species: Cesiribacter andamanensis (50%)
2 1560 bp 64.81 8.33 105.77
sw_11_scaffold_19382
Class: Halobacteria (66.67%)
3 1549 bp 70.37 10.78 105.75
sw_11_scaffold_28110
Species: Rhodothermus marinus (50%)
2 1136 bp 66.55 8.01 105.63
sw_11_scaffold_25270 3 1293 bp 54.06 8.51 105.57
sw_11_scaffold_13057
Species: Anabaena variabilis (66.67%)
3 1172 bp 30.12 4.44 105.46
sw_11_scaffold_7300
Class: Halobacteria (50%)
4 1781 bp 65.13 16.84 105.45
sw_11_scaffold_28492
Species: Halosimplex carlsbadense (50%)
2 1121 bp 66.82 20.79 105.44
sw_11_scaffold_29309 2 1042 bp 59.88 6.33 105.37
sw_11_scaffold_27462
Species: Halococcus saccharolyticus (50%)
2 1045 bp 71.39 39.33 105.36
sw_11_scaffold_13768
Class: Halobacteria (66.67%)
3 1525 bp 68.59 25.90 105.25
sw_11_scaffold_15869 2 1015 bp 59.80 7.68 105.22
sw_11_scaffold_24775
Order: Natrialbales (100%)
3 1100 bp 72.00 19.27 104.73
sw_11_scaffold_25436
Species: Rhodococcus rhodochrous (50%)
2 1331 bp 61.23 8.11 104.58
sw_11_scaffold_20501
Domain: Bacteria (100%)
3 1532 bp 53.72 4.70 104.57
sw_11_scaffold_24805 3 1171 bp 66.78 16.31 104.53
sw_11_scaffold_27916
Order: Halobacteriales (66.67%)
3 1304 bp 71.09 41.64 104.45
sw_11_scaffold_5778 2 2094 bp 63.32 7.59 104.44
sw_11_scaffold_13763
Species: Saprospira grandis (50%)
2 1129 bp 43.84 3.72 104.43
sw_11_scaffold_15589
Species: Methanomethylovorans hollandica (50%)
2 1027 bp 69.81 12.76 104.28
sw_11_scaffold_23378
Species: Pythium ultimum (50%)
2 1281 bp 55.82 4.22 104.21
sw_11_scaffold_17457
Species: Chthoniobacter flavus (50%)
2 1427 bp 69.73 7.71 104.06
sw_11_scaffold_17382
Species: Haloarcula japonica (75%)
4 1789 bp 54.39 10.06 103.97
sw_11_scaffold_22836
Species: Haloterrigena limicola (50%)
2 1322 bp 71.10 18.31 103.93
sw_11_scaffold_13051
Order: Oscillatoriales (66.67%)
3 1172 bp 39.25 55.80 103.93
sw_11_scaffold_25619
Species: CG_CPR10_02 (50%)
2 1363 bp 44.75 4.62 103.89
sw_11_scaffold_12415
Phylum: Proteobacteria (66.67%)
3 1213 bp 63.31 23.41 103.88
Displaying items 1-50 of 13823 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.