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sw_11_scaffold_182_31

Organism: SW_11_Halothece_sp_44_9

near complete RP 49 / 55 MC: 3 BSCG 47 / 51 MC: 4 ASCG 12 / 38 MC: 2
Location: 27712..29262

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=65093 species="Bacteria; Cya similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 540.0
  • Bit_score: 844
  • Evalue 6.10e-242
Transcription-repair-coupling factor n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YE83_HALP7 similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 540.0
  • Bit_score: 844
  • Evalue 4.40e-242
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 540.0
  • Bit_score: 844
  • Evalue 1.20e-242

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Taxonomy

Halothece sp. PCC 7418 → Halothece → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 1551
ATGGCTTTTGCTTCAGTTATTCGCACGCTGGCGCGATCGCGCTTAACACAAGAACTTCTCCAAAGTCTCTTTTCCAATCACACGCTACAACTAAGCGGCATTTCCCGCCTTCCCAAAGGACTCATTGCCTCTGCGTTTACCCAACATTGTTCTAATGACAATACAACCGGAGAAGCGTCTCACCTTGTCGTTATCTGTGCCACGTTAGAAGAAGCCGGGCGCTGGGCAACCCAGTTGCAAAGCATGAACTGGCAAACGGTTCAGTTTTATCCCACCTCAGAAGCGACTCCTTACGAACCGTTTAACCCAGAATCGGAGATGATCTGGGGACAAATCCAAGTTTTATTAAACCTGACACAACAACCGAATTCTCCTTGTCTGTTTTTTCAAAAAGGCATGGCCTTAGAGAGTCAAACTCTTGACCGTCGCCTCACCGAACTGGGTTATGAACGTGTCTCTGTTGTCGAAACCGAAGGCCAATGGGCCCGTCGCGGGGATTTAGTGGATATTTTTCCCGTTACCTCCGAAGTTCCCATCCGCTTAGAATGGTTTGGGGATGAACTGGAACAACTGCGAGAATTTGACCCTGTTAGCCAGCGTTCTCTTGATCAAATTGAAACCCTAACTTTAACACCCACTAGCTATTCTCCCCTCATTGCCCAGGGCATTCAAGAACAGGGCAACTTGGATCGGTTTCAGTCGTTTCTGTCTCAGCAAGAACAAACGGCTTTCCATGAGGAACAAAAATATCCCGAAGGAATGGGGCGATTTTTCGGATTAGCTTATCCGCAACCGGCTTCCTTATTAAATTATCTTCCCCACAATACGTTGGTTGTCCTCGATGAACCCCATCAATGCAGCGCCCACAGCGATCGCTGGCTGGAACATACCGAAGAAAAGTATCAAGAATTGTATCCCGGCCAACAACTGCCTCGCCTCCACACTGACTTAACCAGTTGTTTGCAAAACGCCCAATCCTTTTATCAGCTTCATGTTTCGGAACTGACTGAAGAAAACGACGATAGTGTCAATCTTGCCAGCCGCGCCGTTCCTGTAACCCCGCACCAGTTTGCCAAACTGGCAGAAATTATCCGCGGGCAACGGGAAATTTACAGTGGAATTACCCTGCAAAATTACGACACGTGGATTGTTTCCGCCCAACCCTCGCGATCGGTTTCTCTGTTGCAAGAACACGATTGTCCCGCGCAATTTGTTCCCAATCCCCGCGACTATCCGGCAATTGACAAATTGCACCGCGATAACACTGCCGTTGCTGTCAAATATTCCGGTTTAGCGGAACTGGAAGGCTTTGTTCTTCCCACATTCCGCATTGCGGTTGTCACTGACAGAGAATTTTTCGGGCAACATGTTTTAACCACCCCCAGCTATATTCGCAAACGCCGCCGGGCAACCTCCAAACAAGTCGATCTCAACAAACTGCGTCCCGGTGACTATGTGGTACACCGGCAACATGGCGTGGGGAAATTCTTAAAACTGGAAAGTTGGGAAACCCGGGAATATCTTCTAGTTCAATATGCCGATGGCTTGCTG
PROTEIN sequence
Length: 517
MAFASVIRTLARSRLTQELLQSLFSNHTLQLSGISRLPKGLIASAFTQHCSNDNTTGEASHLVVICATLEEAGRWATQLQSMNWQTVQFYPTSEATPYEPFNPESEMIWGQIQVLLNLTQQPNSPCLFFQKGMALESQTLDRRLTELGYERVSVVETEGQWARRGDLVDIFPVTSEVPIRLEWFGDELEQLREFDPVSQRSLDQIETLTLTPTSYSPLIAQGIQEQGNLDRFQSFLSQQEQTAFHEEQKYPEGMGRFFGLAYPQPASLLNYLPHNTLVVLDEPHQCSAHSDRWLEHTEEKYQELYPGQQLPRLHTDLTSCLQNAQSFYQLHVSELTEENDDSVNLASRAVPVTPHQFAKLAEIIRGQREIYSGITLQNYDTWIVSAQPSRSVSLLQEHDCPAQFVPNPRDYPAIDKLHRDNTAVAVKYSGLAELEGFVLPTFRIAVVTDREFFGQHVLTTPSYIRKRRRATSKQVDLNKLRPGDYVVHRQHGVGKFLKLESWETREYLLVQYADGLL