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sw_11_scaffold_2181_6

Organism: SW_11_Halothece_sp_44_9

near complete RP 49 / 55 MC: 3 BSCG 47 / 51 MC: 4 ASCG 12 / 38 MC: 2
Location: comp(5210..6820)

Top 3 Functional Annotations

Value Algorithm Source
NusA antitermination factor n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y8T5_HALP7 similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 395.0
  • Bit_score: 678
  • Evalue 7.30e-192
NusA antitermination factor similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 395.0
  • Bit_score: 678
  • Evalue 2.10e-192
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothe similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 395.0
  • Bit_score: 678
  • Evalue 1.00e-191

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Taxonomy

Halothece sp. PCC 7418 → Halothece → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 1611
ATGACTCATCCCCTGATTCCCCAAATTACTGAAATTGCTACTCCCATTGCCGATGATCTGGGCTTAGAATTGGTTGAAATTGCCTTTTATACCAATGAAAGCCCCCCCGTCTTAAAAGTGGAGGTTCGCAACCCAGAAGACGATACCAGCTTAGATGACTGTAAACAAATGAGCCGCGCCTTAGAAGCCGAACTGGATGTGGCTAAGGTGATTGCCCATGCTTATGTGTTAGAAGTATCTAGTCCTGGAATTTCAGAACAACTCACGCGCGATCGCGAATATGTCAGCTTTAAGGGCTTTCCTGTGTTGGTCACTACCGATCCCCCCTATAAAGGGAAACCTAAGTGGCAGGGAACCCTCAATTGTCGAGACGAAACCACAGTCTATATCAATCAAAAAGGAAAAATTATTAAAATTCCCCGTCCCCCCAGCGCTGTAAAAGCTGCCCTACAAGAAGCGCTTTTAAAAGGATATGAACGCTATCGAAAAGCGCAAATCTTAGACCGCGATCACTTCAGCGATGACTACTTTGACAACTTTGAAGTTCAACTTGATGTGGAAGAAGAAGGCTTTTTAGTCCTAGCAACCAAAGAAATTGTCGAGGAAGTTACCAACCCGGATCACCAAATTGGGCTTAAAGAAGTGAAGGAAGTGGCTGAAGAAGCGGAACTCGGCGATAGCGTCGTTTTGGATGTTACCCCGCAACAAAAAGAATTTGGCCGCATGGCTGCCATTCAAACCAAACAAGTTCTCATGCAAAAACTGCGCGATCAGCAGCGCCGCATGATTCAAGAAGAATTCCAAGACCTGGAAGAAACGGTTTTACAAGCGCGTGTGATGCGATTTGAGCGTCAATCGGTGATTATGGCAGTCAGCAGCGGTTATGGCCGTCCGGAAGTGGAAGCGGAACTCCCGCGCAAAGAACAACTTCCCAATGACAATTATCGCGCCAACGCCGCCTTTCGCGTTTACTTGAAAAAAGTGCGCGAAGGAGTAAGCAGGGGTCCCCAATTAATTATCTCTCGCGCTTCAGCAGGCTTAGCGGCTTACTTGTTTGAAAACGAAGTTCCCGAAATTCAAGATGAAGTCGTCCGCATTGTTGCCGTGGCGCGGGAAGCGAATCCTCCCTCTCGCAATGTTGGGTCCCGCACCAAAATTGCTGTAGATACCCTAGATCGGGATGTTGACCCCGTTGGGGCTTGTATCGGCGCTAGAGGATCCCGCATCCAAGCAGTGGTCAATGAACTGCGCGGGGAAAAAATTGATGTTATTCGTTGGTCCCCTGACCCGGAAATTTATATTCAAAATGCTTTGAGTCCGGCGCAAATTAATCGCGTTATTTTAATGGATACCGAACAACGACACGCGCAAGTGTTAGTGCCGGAAAATCAACTGAGTTTAGCCATTGGCAAAGATGGGCAAAATGTTCGTCTCAGCGCTCATTTAACCGGTTGGAAAATCGATATTAAACAAGTGAAGGAAAATGAGGAGCAAATGGAAGAAGATACGGCGCAAGCGGCAGAAGGGGAAACCGTAGAGGAATTTTCCCCCGATTATGAAGAAACGGTCGAAGCGCAAACTTCCCCGCTAGAAGCTAATATAGATGATTGA
PROTEIN sequence
Length: 537
MTHPLIPQITEIATPIADDLGLELVEIAFYTNESPPVLKVEVRNPEDDTSLDDCKQMSRALEAELDVAKVIAHAYVLEVSSPGISEQLTRDREYVSFKGFPVLVTTDPPYKGKPKWQGTLNCRDETTVYINQKGKIIKIPRPPSAVKAALQEALLKGYERYRKAQILDRDHFSDDYFDNFEVQLDVEEEGFLVLATKEIVEEVTNPDHQIGLKEVKEVAEEAELGDSVVLDVTPQQKEFGRMAAIQTKQVLMQKLRDQQRRMIQEEFQDLEETVLQARVMRFERQSVIMAVSSGYGRPEVEAELPRKEQLPNDNYRANAAFRVYLKKVREGVSRGPQLIISRASAGLAAYLFENEVPEIQDEVVRIVAVAREANPPSRNVGSRTKIAVDTLDRDVDPVGACIGARGSRIQAVVNELRGEKIDVIRWSPDPEIYIQNALSPAQINRVILMDTEQRHAQVLVPENQLSLAIGKDGQNVRLSAHLTGWKIDIKQVKENEEQMEEDTAQAAEGETVEEFSPDYEETVEAQTSPLEANIDD*