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sw_11_scaffold_959_6

Organism: SW_11_Halothece_sp_44_9

near complete RP 49 / 55 MC: 3 BSCG 47 / 51 MC: 4 ASCG 12 / 38 MC: 2
Location: 3925..4347

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 139.0
  • Bit_score: 179
  • Evalue 3.00e-42
Ribonuclease VapC n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TBL3_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 139.0
  • Bit_score: 181
  • Evalue 7.40e-43
putative nucleic acid-binding protein, contains PIN domain similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 139.0
  • Bit_score: 179
  • Evalue 6.00e-43

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Taxonomy

Oscillatoria acuminata → Oscillatoria → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 423
GTGACGAGTAAAATTTTTGTGGATACTTCAGGCTGGGCAAATTTATTTGTTAGTACCGAATCGTGTCATTACCAAGCTAGCCAGTATTTTGCACAGTTTCGCCAACAAAAACAAATCATCATAACCAGTAACTATATTATTGCCGAATTAGTGGCTCTCTTTCATAGCCCTTTAAGGTTATCTAGACCTCAATTGGTTCAATATATTGAAGCGATCAAAGCAGCCTCTTATGTGAAATTAATCTATGTTGATTCAGAAATTGATGAATCTGCTTGGAATTTATTAAAAAATCGAACAGATAAAACTTGGTCTTTGGTTGATGCAAGTTCCTTTATTATCATGCAAAACTTGAATATTCAAACAGCTTTAACGAGCGATTATCATTTTGAACAAGCTGGCTTTACTTGTTTACTGAAGCCTTAG
PROTEIN sequence
Length: 141
VTSKIFVDTSGWANLFVSTESCHYQASQYFAQFRQQKQIIITSNYIIAELVALFHSPLRLSRPQLVQYIEAIKAASYVKLIYVDSEIDESAWNLLKNRTDKTWSLVDASSFIIMQNLNIQTALTSDYHFEQAGFTCLLKP*