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sw_11_scaffold_3288_3

Organism: SW_11_Oscillatoriophycideae_48_12

near complete RP 49 / 55 MC: 3 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 1800..2030

Top 3 Functional Annotations

Value Algorithm Source
PilE(General secretion pathway protein H) n=1 Tax=Raphidiopsis brookii D9 RepID=D4TNG5_9NOST similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 75.0
  • Bit_score: 67
  • Evalue 5.00e-09
PilE(General secretion pathway protein H) {ECO:0000313|EMBL:EFA74054.1}; TaxID=533247 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Raphidiopsis.;" source="Raphidiopsis brookii D9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 75.0
  • Bit_score: 67
  • Evalue 6.90e-09
pilA-1; type IV pilin PilA similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 55.0
  • Bit_score: 63
  • Evalue 2.60e-08

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Taxonomy

Raphidiopsis brookii → Raphidiopsis → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 231
ATGGAGCTGCTAGTCGTGATTGTCATCGTCGGCATCCTCGGCGCGATCGCGCTGCCTAACTTCCTGCGCCAAGCAGATCGCGCTCGGGTAACTGGGGCGAAAGAGGCACTGCGCTATACCAACCAGACTCAAAAGATCTACTACCTGGAAAACAGCGGGTTTGCCCACACCTATGAGGAGTGGGAGTTTCAGCCTGTCGCCGAAAGCTATGAGTTAACCCAGCCCAAGTAA
PROTEIN sequence
Length: 77
MELLVVIVIVGILGAIALPNFLRQADRARVTGAKEALRYTNQTQKIYYLENSGFAHTYEEWEFQPVAESYELTQPK*