ggKbase home page

sw_11_scaffold_81_7

Organism: SW_11_Oscillatoriophycideae_48_12

near complete RP 49 / 55 MC: 3 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(5177..5620)

Top 3 Functional Annotations

Value Algorithm Source
Transposase n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YTJ4_LYNSP similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 145.0
  • Bit_score: 161
  • Evalue 4.90e-37
Transposase {ECO:0000313|EMBL:EAW35665.1}; TaxID=313612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106) (Lyngbya aestuarii (s similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 145.0
  • Bit_score: 161
  • Evalue 6.80e-37
transposase IS891/IS1136/IS1341 family similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 149.0
  • Bit_score: 158
  • Evalue 2.00e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lyngbya sp. PCC 8106 → Lyngbya → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGGTCAGCAGTAATCGCTTGGTTGCTACGGAAAAGCTAAACCTTAAGGGCATGACTCGCAAGGGGAAGAGACAAAAGACGGGACTCAATCGTTCTATTGTTGATGTCGCTATCGGTAAAACTAAAGATGGGATTAAGTACAAAGTTGAGGAGGCTAACGGGGTCTACTTGGAGACTCCTACCCGACAATTAAAGCCAACACCACCTTGTGCTAAACGTTGGGAGACTAAACCTAAAACTTGGTCTGATCGCGTCCACCACTGCCAAGGTTGCGGTCATAGCGAAGACAGAGACATCAACGCTGCCCAAGTAATTGTGATTGGGGCGAGGGGGCAGGAACTGTCCTCTTCAGACGTAGAGCCGTCTAGCTCTGTTTCATGCGGAAGTATGAAAAAAACTAGGGGCAAAGAAGCGCAGAAACAGCCAGCACAGCGAAGCGGCTAG
PROTEIN sequence
Length: 148
MVSSNRLVATEKLNLKGMTRKGKRQKTGLNRSIVDVAIGKTKDGIKYKVEEANGVYLETPTRQLKPTPPCAKRWETKPKTWSDRVHHCQGCGHSEDRDINAAQVIVIGARGQELSSSDVEPSSSVSCGSMKKTRGKEAQKQPAQRSG*