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sw_11_scaffold_1084_11

Organism: SW_11_Bacteroidetes_45_7

near complete RP 48 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 6 / 38 MC: 2
Location: comp(10768..11664)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMJ6_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 288.0
  • Bit_score: 360
  • Evalue 1.40e-96
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIF27009.1}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU21 similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 289.0
  • Bit_score: 361
  • Evalue 1.60e-96
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 288.0
  • Bit_score: 360
  • Evalue 4.10e-97

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Taxonomy

Aphanocapsa montana → Aphanocapsa → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 897
TTGCGTAATAAGGTACAAAACCTTAACGAAATGAGAGAACTTAAGATCACAAATCAAGTTACAAACAGGGACAGCATCTCCCTGGAAAAGTACCTGAAGGACATCAGTAAAGAGGAACTGCTAAAACCGGAAGAAGAAGCAGATTTGGCACGGAGGATTCAAAAAGGGGACCCCGAGGCCCTTGAACGCCTCACGCGTGCTAATCTTCGCTTTGTTGTGTCGGTTGCTAAGCAGTATCAGAACCATGGTCTGCCCCTCAGCGACCTGATCAATGAAGGGAATCTTGGCCTTATCAAAGCTGCTGAGAAATTCGATGAAAAGCGCGGTTTCAAATTTATCTCTTACGCTGTATGGTGGATCCGGCAATCCATTATGCAAGCTCTTGTAGAACAATCGCGCATTATCCGGCTTCCCTTGAATAAGGTGGGGTCCTTCAACAAGGTCAGCAAAGCTATGACTGACTTTGAGCAGCAATATCAACGAGAGCCCACCAATGAGGAGCTTGAAGAGATACTTGACATCGATAAGGAAGAGATCAACGAAGTGGTGAAATCGGCTCTTGAGCACCAGTCCACAGACGCGCCAATGTCGAGTGATGAAGAGAGCGGCACTCTGTTAGATGTCCTCTCTCAGGATGAGGAGAATCAGGTGGAACAAGAGATGCTCGATGATTCCCTCAAAAACGAAATCAAGCGCGTGCTTACGATTTTGCCTTCGCGCGATGCTGACATTATCAAGACGTATTTCGGGCTCGATGGTGGTGTAGGGCTTACGCTGGAGGAAATAGGCGACCAATTCGGGCTTACGCGGGAGCGCGTACGCCAGATCAAAGAACGGTCGCTAAGGCGGTTGCGGAGAGCCACGTCATCGAAATCCTTAAAGAGCTATCTTAGCTGA
PROTEIN sequence
Length: 299
LRNKVQNLNEMRELKITNQVTNRDSISLEKYLKDISKEELLKPEEEADLARRIQKGDPEALERLTRANLRFVVSVAKQYQNHGLPLSDLINEGNLGLIKAAEKFDEKRGFKFISYAVWWIRQSIMQALVEQSRIIRLPLNKVGSFNKVSKAMTDFEQQYQREPTNEELEEILDIDKEEINEVVKSALEHQSTDAPMSSDEESGTLLDVLSQDEENQVEQEMLDDSLKNEIKRVLTILPSRDADIIKTYFGLDGGVGLTLEEIGDQFGLTRERVRQIKERSLRRLRRATSSKSLKSYLS*