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sw_11_scaffold_328_14

Organism: SW_11_Bacteroidetes_45_7

near complete RP 48 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 6 / 38 MC: 2
Location: 13697..13996

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQD5_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 92.0
  • Bit_score: 138
  • Evalue 3.90e-30
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIF22446.1}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU21 similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 92.0
  • Bit_score: 139
  • Evalue 2.40e-30
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 92.0
  • Bit_score: 138
  • Evalue 1.10e-30

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Taxonomy

Aphanocapsa montana → Aphanocapsa → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 300
GTGAAGTGCAAACCACCCTTTCTTGAAAATGGCAATGCCAAGGAAGCTGACAATGAGCTTGAATACGGTGAATCTCTGAGAAAAGAAATTGAACGTTCTTTGTCAACACTCAGCGAACGGCAAAGGGACATCATTAAGCTCTATTATGGTATTAGTGTTAAGCATACCATGTCCCTTGAAGATATTGGTGAAAACTTTGGCTTAACACGCGAGCGTGTACGTCAAATCAAGGATAAAGCTATTAATAAGCTTCGTACTACATCCAGAAGTAAGTTGCTGAAATCCTATTTAGGAAGCTAA
PROTEIN sequence
Length: 100
VKCKPPFLENGNAKEADNELEYGESLRKEIERSLSTLSERQRDIIKLYYGISVKHTMSLEDIGENFGLTRERVRQIKDKAINKLRTTSRSKLLKSYLGS*