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sw_11_scaffold_3172_1

Organism: SW_11_Bacteroidetes_45_7

near complete RP 48 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 6 / 38 MC: 2
Location: comp(1..579)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KS92_HALH1 similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 192.0
  • Bit_score: 250
  • Evalue 1.00e-63
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 192.0
  • Bit_score: 250
  • Evalue 2.90e-64
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEE52337.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 192.0
  • Bit_score: 250
  • Evalue 1.50e-63

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Taxonomy

Haliscomenobacter hydrossis → Haliscomenobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGCGTACTGACCAAACGGACGACAAACAACTCATTCAACAGTATTTAGAAGGCCGGGAATCCGCGCTCAACATCCTGATCGACCGGCATAAAGATAAGGTCTACAGTTCCATCTACATGTTCGTCAAGGACGAATCGCTGGCCGAGGATATCTTCCAGGAAACATTTATCAAGGTGGTTGACACACTTCGCTCCGGCAAGTACAAAGAAGAAGGCAAGTTCCTGCCCTGGGTTATGCGTATTGCCAATAACCTGTGCATCGATTACTACCGCAAGACAAAGCGAGCGCCTAAAGTAGCAACAGGCGATGGGTTCGATATTTTCGATATCCTGGTATTCGATGAGGATAATGCCGAGGATGAGATGATCAAAGGCCAAAGCCGTAACAAGATCAAGAAGCTCATTAATGAACTTCCCCGGGAGCAAAGAGAAGTGCTCATCATGCGCCACTATTCCGAGCTCAGTTTCAAAGAGATAGCCAGGATAACGGATGTGAGTATCAACACAGCTCTGGGCCGGATGCGCTATGCGCTCATCAACCTGCGCAAGATGATCGAGGAAAAGAAGATGACTGTTTAG
PROTEIN sequence
Length: 193
MRTDQTDDKQLIQQYLEGRESALNILIDRHKDKVYSSIYMFVKDESLAEDIFQETFIKVVDTLRSGKYKEEGKFLPWVMRIANNLCIDYYRKTKRAPKVATGDGFDIFDILVFDEDNAEDEMIKGQSRNKIKKLINELPREQREVLIMRHYSELSFKEIARITDVSINTALGRMRYALINLRKMIEEKKMTV*