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sw_11_scaffold_372_2

Organism: SW_11_Salinibacter_ruber_64_17

partial RP 38 / 55 MC: 4 BSCG 39 / 51 MC: 4 ASCG 9 / 38 MC: 4
Location: comp(1593..2993)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=24659719 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 442.0
  • Bit_score: 842
  • Evalue 2.60e-241
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL: similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 442.0
  • Bit_score: 842
  • Evalue 3.60e-241
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 442.0
  • Bit_score: 842
  • Evalue 7.20e-242

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1401
ATGCCGTACGGTAATTCCACAGAGATCAAGACGGACTTCGACAGCATCACCATCAGCCTTGCGTCTCCGGAAGACATCCTGGAGCGGTCGTACGGCGAGGTGATGAAGCCCGAGACCATCAACTATCGGTCCTTCAAGCCGGAGATGGGCGGCCTCTTTTGCGAGAAGATCTTCGGGCCAGTCAAGGACTACGAGTGCCACTGCGGGAAGTACAAGCGCATCCGGTACAAGGGCATTATCTGTGACCGGTGTGGCGTGGAGGTCACCCGCAAGGCGGTCCGCCGGGAGCGCATGGGGCACATTTCCCTGAGCGTGCCGGTGGTCCACATCTGGTACTTCAAGACGCTGCCCAACAAGATTGGGCACCTGCTGGGCCTGAAGTCGAAGGACCTGGAGAAGGTCATTTACTACGAGAACTATATTGTCATCCAGCCGGGAACGGCCGAGCGGCTTGGGGTCGAGAAGAACCAGCTCCTGACGGAGGAGGAGTACTACGAGATCCTCTACCAGATCCGGGATGACAACAACCGGCTCCAGGACGACAACGAGGAGAAGTTCATCGCCAAGATTGGTGGGGAGGCAGTCGAGACGATGCTCGAACGCCTCGAGCTCGACAGGCTTGCGCAGGACCTTCGCTTCCAGGTCAAGACCGAGACGAGCCAGCAGCGGAAGTCGAAGGCCCTGAAGCGCCTCAACGTCGTAGAGGCCTTCCGCGAGGCGAACCGGGACGGCGAAAACAAGCCGACCCAGATGGTCATGCGGGTCATTCCGGTCATTCCGCCGGAGCTCCGGCCCCTGGTGCCGCTGGATGGGGGACGATTCGCGACCAGCGACCTGAACGACCTGTACCGACGGGTTATTATCCGTAACAATCGTCTCAAGCGCCTCATCGACATCAAGGCGCCGGAGGTCATCCTGCGGAACGAGAAGCGCATGCTGCAGGAGGCGGTCGACTCCCTCTTCGACAACAGCCGCAAGTCCAACTCGGTGCGTGGCTCGTCGGACCGGCCGCTCAAGAGCCTCAGCGACATGCTGAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTTGGGAAGCGCGTCGACTACTCGGGCCGGTCGGTCATTGTGTCGGGACCGCACCTGGAGCTTCACCAGTGTGGCCTGCCGAAGGAGATGGCCGTCGAGCTCTTCAAGCCGTTTATCATTCGTCGTCTCATCGAGCGCGGCATCGTCAAAACGGTCAAGAGCGCGAAGAAGTACGTCGATAAGAAGACGGAAGACGTTTGGGACATCTTAGAGAAGGTGATTCAAGGACGACCGGCTCGGCATTCAGGCCTTCCAGCCAGTCCTTACCGAGAACAAGGCCATCGAAATTCATCCGCTCGTCTGCCCGGCGTACAACGCGGACTTCGACGGTGA
PROTEIN sequence
Length: 467
MPYGNSTEIKTDFDSITISLASPEDILERSYGEVMKPETINYRSFKPEMGGLFCEKIFGPVKDYECHCGKYKRIRYKGIICDRCGVEVTRKAVRRERMGHISLSVPVVHIWYFKTLPNKIGHLLGLKSKDLEKVIYYENYIVIQPGTAERLGVEKNQLLTEEEYYEILYQIRDDNNRLQDDNEEKFIAKIGGEAVETMLERLELDRLAQDLRFQVKTETSQQRKSKALKRLNVVEAFREANRDGENKPTQMVMRVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIDIKAPEVILRNEKRMLQEAVDSLFDNSRKSNSVRGSSDRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVSGPHLELHQCGLPKEMAVELFKPFIIRRLIERGIVKTVKSAKKYVDKKTEDVWDILEKVIQGRPARHSGLPASPYREQGHRNSSARLPGVQRGLRR*