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sw_11_scaffold_415_12

Organism: SW_11_Salinibacter_ruber_64_17

partial RP 38 / 55 MC: 4 BSCG 39 / 51 MC: 4 ASCG 9 / 38 MC: 4
Location: 12953..13513

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG02_RHOM4 similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 182.0
  • Bit_score: 159
  • Evalue 4.00e-36
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 182.0
  • Bit_score: 159
  • Evalue 1.10e-36
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACY49491.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 182.0
  • Bit_score: 159
  • Evalue 5.60e-36

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Taxonomy

Rhodothermus marinus → Rhodothermus → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGGAATGCAAAGAGTCTGAGTGGGCGGATCAAATACGAGCGGGAAGCGAAGAGGCTTTTCGGAAGGTGTTTCACGCTTACTACTCAGAGCTATGTGGCTTTGCGGCGGACTATCTGGACTCAGTGGATCGGGCCCGCGATGTCGTTCAGGAGGTCTTTCTTAGAATCTGGCTGCGGCGTGAGAAACTGGATATACGAGTTTCGCTCAAGTCGTACTTGTACCAGGCGGTCCGGAACCGGGCGCTGAACCACATTCGGCGCTCCGAGACCAAGGATGAGTTCCAGGACCACGTGAGACATACGTCGGACGAATCGGACCAGCGTACGGCAATAGACACCTTCCACATGAAAGAACTGTCCGAGGACGTAAACGAAGCGATCGCCGACCTTCCGGATCGACGACGGATGGCGTTTTTGCTGCACCGCCGGCACGGATTTACCTACAAGGAAATTGCTCAAATCATGGAGATCTCGCCGAAGACCGTAGAAAATCAGATCGGGCGTGCCCTCAAGTCTCTCCGGTCGCAGCTAAAGGATCGGTTTACCAGGGAACTTGACTAG
PROTEIN sequence
Length: 187
MECKESEWADQIRAGSEEAFRKVFHAYYSELCGFAADYLDSVDRARDVVQEVFLRIWLRREKLDIRVSLKSYLYQAVRNRALNHIRRSETKDEFQDHVRHTSDESDQRTAIDTFHMKELSEDVNEAIADLPDRRRMAFLLHRRHGFTYKEIAQIMEISPKTVENQIGRALKSLRSQLKDRFTRELD*