ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

sw_11_scaffold_1225_1

Organism: SW_11_Salinibacter_ruber_64_40

near complete RP 47 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 12 / 38
Location: comp(1..540)

Top 3 Functional Annotations

Value Algorithm Source
Putative outer membrane protein TolC n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H720_SALRM similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 182.0
  • Bit_score: 263
  • Evalue 1.90e-67
outer membrane protein TolC similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 182.0
  • Bit_score: 263
  • Evalue 5.30e-68
Putative outer membrane protein TolC {ECO:0000313|EMBL:CBH23825.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 182.0
  • Bit_score: 263
  • Evalue 2.70e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 540
ATGATCCCTCGTTTTCGTCTCGCCGCGGGTTTGCTTCTCCTCGGGGCAGTGCTTTTTCCGGCGTCCGTTCAGGCGCAACCGGCGCCCGACACCCTTCGCCTCGACGCCGCCGTCCAGCGTGCCCTCCAGAACAACCAGCAGGCCCAGATTGCCCGGCGCGAGGTCGACATCGCCGAGAATAACGTCTCGGTCGGCAATGCCGGCTTTCTGCCGACGCTCACGGGGCAGGCCGGGTACTCGGAGACGGTCGCGTCGTCCGATCAGACGTTTCTTGGGGGGCAGACGCAGAACACGGACGGAGCGAAGACCACTCAATCCAACGCAGGGGTCGATCTTCGGTGGACCGTGTTCGATGGGCTGCGGCCGTTTGCGACGTACGATCGCCTCGGGGCCGAGCGGGACCGGCAGGCGGCCGCAACGACGGAGGAGCTGGAGGCCCTGGCGGCCGACGTGATCGAGGGATATTATGACGTGGCGCGGCGGCAGCAGCAACTGGCGGTGCTGCGCGAGGCGGTCTCGGTCTCCCGCGAGCGCCTCCGC
PROTEIN sequence
Length: 180
MIPRFRLAAGLLLLGAVLFPASVQAQPAPDTLRLDAAVQRALQNNQQAQIARREVDIAENNVSVGNAGFLPTLTGQAGYSETVASSDQTFLGGQTQNTDGAKTTQSNAGVDLRWTVFDGLRPFATYDRLGAERDRQAAATTEELEALAADVIEGYYDVARRQQQLAVLREAVSVSRERLR