ggKbase home page

sw_11_scaffold_163_2

Organism: SW_11_Salinibacter_ruber_64_40

near complete RP 47 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 12 / 38
Location: 644..1219

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAL4_SALRM similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 191.0
  • Bit_score: 343
  • Evalue 1.20e-91
rpoE; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 191.0
  • Bit_score: 343
  • Evalue 3.30e-92
RNA polymerase sigma factor {ECO:0000313|EMBL:CBH25069.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 191.0
  • Bit_score: 343
  • Evalue 1.60e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 576
ATGGAAATGCCCCACCCCTGCACCGCCAACGACCCGAGCGTCGACGCCCTCAAGGCCGGAAGCGAGCACGCCTTTCGGTGTCTCTTCGAACAGGAGCGGGAACGCCTCCGTCGCTTCGTTCTCAAACTGATCGACGACGCCGACGAGGCCGAAAACATCGTTCAGGAGACCTTCACGGAGGCCTACCAGCAGATCGAGGACTTCCGGGGCGAGTCGTCAGTGTCCACCTGGCTGTTCTCCATCGCCAAGCACCTGGCGTACGGCCACCTCCGGACGTCCGACCGGCACAATTACCTCGAACACGAAACCATCGAGTTCCTGCAGGCCGATCAGGGCGGGAGTGCAGCGGCCACCCGGAAGGAGGTGGAGCTCTCGGAGCGGAAGCAGATCGTGCACGACGCCCTCCAGGAGCTGCCGGAGCACTACCGGCGCGTCGTGCAGTTGCGCGACCTGGAAGAAAAATCAACGCGAGAAACCGCCGAGCAACTGGAGCTGACGGAGGTCAACGTGCGGGTCCGCCTCCATCGTGCCCGCAAACAACTTCGCGAGCACCTCTGCGAACGGATGGAATGCTGA
PROTEIN sequence
Length: 192
MEMPHPCTANDPSVDALKAGSEHAFRCLFEQERERLRRFVLKLIDDADEAENIVQETFTEAYQQIEDFRGESSVSTWLFSIAKHLAYGHLRTSDRHNYLEHETIEFLQADQGGSAAATRKEVELSERKQIVHDALQELPEHYRRVVQLRDLEEKSTRETAEQLELTEVNVRVRLHRARKQLREHLCERMEC*