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sw_11_scaffold_5639_1

Organism: SW_11_Natronomonas_69_45

partial RP 7 / 55 BSCG 3 / 51 ASCG 17 / 38 MC: 3
Location: comp(3..173)

Top 3 Functional Annotations

Value Algorithm Source
truB; H/ACA RNA-protein complex component Cbf5p (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 57.0
  • Bit_score: 103
  • Evalue 2.20e-20
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 57.0
  • Bit_score: 103
  • Evalue 1.10e-19
Probable tRNA pseudouridine synthase B n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMV7_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 57.0
  • Bit_score: 103
  • Evalue 7.90e-20

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Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 171
ATGCGCGAGCGCGGCCCTCCCGCGTCGCGGGACCCCGAGGAACTGCTCTCCTTTGGGGTCGTCAACCTCGACAAGCCGCCGGGGCCCTCTGCCCACCAGGTGGCCGCCCGGGTCCGGGACGCCGCCGACGTCGAGCGGGCCGCCCACGCCGGCACGCTCGACCCCAAGGTG
PROTEIN sequence
Length: 57
MRERGPPASRDPEELLSFGVVNLDKPPGPSAHQVAARVRDAADVERAAHAGTLDPKV