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sw_11_scaffold_15556_1

Organism: SW_11_Halococcus_67_16

partial RP 15 / 55 MC: 3 BSCG 13 / 51 MC: 2 ASCG 20 / 38 MC: 1
Location: comp(1..498)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 166.0
  • Bit_score: 308
  • Evalue 5.10e-81
DNA-directed RNA polymerase subunit D n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ17_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 166.0
  • Bit_score: 310
  • Evalue 1.20e-81
RNA polymerase insert similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 162.0
  • Bit_score: 258
  • Evalue 1.60e-66

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 498
GTGAGCGCCGCGTACGACGTCGCGTTCATCGACCGCGACGACCGCGACGCTCGCTTCCTCGTCAGAGGGATCACGCCGGCGTTCGCCAACGGTATCCGGCGGGCGATGGTGGCCGACGTTCCCACCCTGTCGATCGACACCGTGCGCGTGGTCGAGAACTCGTCGGTGATGTTCGACGAGCAGATCGGCCACCGGCTCGGGATGGTGCCCCTTTCCGCGCCGCCGAACGAGTTCGAATCGGGCGAGGGCGTCACGCTGGCCCTCGACGTTTCGGGCCCCGACACCGCGTACTCGGGCGACCTCGTCAGCAGCGATGCGGTGGTCGAACCCGCCGAGGACAACGTCCCGATCATCGAGCTCAAGGAGGGCCAGCGCCTCGAAGTCGAGGCCGAGACCGTGCTCGATACCGGCAAGTCCCACGCCAAACACCAGGGCGGCGTGGCGGTCGGCTACCGCCATCTCCAGCGGGTGGAAGTCGTCGGCGACCGCGAGGAGTTC
PROTEIN sequence
Length: 166
VSAAYDVAFIDRDDRDARFLVRGITPAFANGIRRAMVADVPTLSIDTVRVVENSSVMFDEQIGHRLGMVPLSAPPNEFESGEGVTLALDVSGPDTAYSGDLVSSDAVVEPAEDNVPIIELKEGQRLEVEAETVLDTGKSHAKHQGGVAVGYRHLQRVEVVGDREEF