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sw_11_scaffold_8559_2

Organism: SW_11_Halococcus_67_16

partial RP 15 / 55 MC: 3 BSCG 13 / 51 MC: 2 ASCG 20 / 38 MC: 1
Location: comp(71..1591)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 506.0
  • Bit_score: 940
  • Evalue 8.00e-271
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 509.0
  • Bit_score: 807
  • Evalue 2.80e-231
DNA-directed RNA polymerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG30_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 506.0
  • Bit_score: 940
  • Evalue 5.70e-271

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1521
CAGCGCCACCTCTCCGATGGCGACATCGTGATCTTCAACCGCCAGCCGTCGCTCCACCGGATGAGTATCATGGCCCACGAGGTCGTGGTGATGCCGTACAAGACCTTCCGGCTGAACACGACTGTCTGTCCGCCCTATAACGCTGACTTCGACGGCGACGAGATGAACATGCACGCCCTCCAGAACGAGGAGGCGCGTGCGGAGGCCCGCGTGCTGATGCGTGTCCAAGAGCAGATCCTCTCGCCCCGCTTCGGCGGGAACATCATCGGTGCGATCCAGGACCACGTCTCGGGAACCTATCTCCTCACCCACGACGATCCCGAGACCGGCGGGGTGCCCCGCTTCAACGAGACCCAGGCCCTCGATCTGCTCCGGGCGACCGCGGTCGACGGGCTGCCCGACCCCGACGGCGAGACGGAGACCGGTCCGTACTGGACGGGCCGGACGATCTTCTCCGAACTCCTGCCGGACGGACTCGATCTCGAGTTCACCTCGTCGGCCGGCGACACGGTCGTGATCGAGGACGGCCAGCTCCTCGAGGGGACCGTCGACGAGGACGCGGTCGGGGCGTTCGGCGGCGAGGTCGTCGATACCGTCGTGAAAAAGCATGGCGAGACCCGCGCCCGCGTGCTCATCAACGAGGTCGCGTCGCTGGCGATGCGTTCGATCATGCACTTCGGGTTCTCGATCGGGATCGACGACGAGTCGATCTCCGCCGACGCCGAGACCCGGATCGACGAGAGCATTGCGAATGCCTACGAGCGGATCGACGAGCTCATCACGACCTACGAGAACGACGAGCTCGAATCGCTGCCAGGGCGAACGGTCGACGAGACCCTCGAAATGAAGATCATGCAGACGCTCGGGAAGGCCCGTGACTCGGCGGGCGACATCGCGGAAGACCACTTCGCGGAGGACAATCCCGCGGTGGTCATGGCCGAATCCGGCGCGCGTGGTTCGATGCTCAACCTCACCCAGATGGCGGCCTGCGTCGGCCAGCAGTCGGTCCGTGGCGAGCGGATCAACCGCGGGTACGAGGACCGCACCCTCAGTCACTACCGGCCGAACGACCTCTCGGCGGACGCTCACGGGTTCGTCGAGCACTCCTACCGGAGCGGGCTCGGGCCGCGGGAGTTCTTCTTCCACGCGATGGGCGGCCGCGAGGGGCTCGTGGACACGGCGGTCCGGACCTCGAAGTCGGGCTACCTCCAGCGCCGGCTGATCAACGCGCTGTCGGAGCTCGAAACCCAGTACGACGGCACCGTGCGGGACACCAACGACAACATCGTCCAGTTCGAGTTCGGCGAGGACGGCACCAGCCCGGTGGAGGTCTCCTCCAGCGCCGACCACGAGATCGACGTCGAATCGATCGCGGACGACGTCCTCGCGGCGGAGTTCGAGGACGAGGGCGAGGCGTTTATCGCCGAGCCGACGACCAACCTCTCGGAGGACGCCGACGACCGGATGATCGACGATCGTACGGATTCGCCGATCGAGGTGCCACAGGTGAACGATGACTGA
PROTEIN sequence
Length: 507
QRHLSDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTTVCPPYNADFDGDEMNMHALQNEEARAEARVLMRVQEQILSPRFGGNIIGAIQDHVSGTYLLTHDDPETGGVPRFNETQALDLLRATAVDGLPDPDGETETGPYWTGRTIFSELLPDGLDLEFTSSAGDTVVIEDGQLLEGTVDEDAVGAFGGEVVDTVVKKHGETRARVLINEVASLAMRSIMHFGFSIGIDDESISADAETRIDESIANAYERIDELITTYENDELESLPGRTVDETLEMKIMQTLGKARDSAGDIAEDHFAEDNPAVVMAESGARGSMLNLTQMAACVGQQSVRGERINRGYEDRTLSHYRPNDLSADAHGFVEHSYRSGLGPREFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELETQYDGTVRDTNDNIVQFEFGEDGTSPVEVSSSADHEIDVESIADDVLAAEFEDEGEAFIAEPTTNLSEDADDRMIDDRTDSPIEVPQVNDD*