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sw_11_scaffold_12397_1

Organism: SW_11_Gammaproteobacteria_65_8

partial RP 21 / 55 MC: 3 BSCG 23 / 51 MC: 2 ASCG 4 / 38 MC: 1
Location: comp(2..370)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide biosynthesis protein, O-antigen flippase n=1 Tax=Marinobacter hydrocarbonoclasticus ATCC 49840 RepID=H8WAK8_MARHY similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 116.0
  • Bit_score: 104
  • Evalue 5.90e-20
Membrane protein {ECO:0000313|EMBL:KHO66282.1}; TaxID=400095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas tuomuerensis. similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 116.0
  • Bit_score: 113
  • Evalue 3.00e-22
wzx; O-antigen flippase similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 116.0
  • Bit_score: 104
  • Evalue 1.70e-20

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Taxonomy

Pseudomonas tuomuerensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGGAGGGCTCGCAGGGGATCAATGCGGTCCTGCGCACTGGTGCGCTCGCGAGCAAGTTCGTCCTGATTATGGCTCTTGCTCGGTTCCTCTCCCCGTCGGAGGTGGGCCTGTTCGGCCTTTTCATGGTGACAGTGACGTACGCAATGCTCGCGGTGGGGCTGAGCTTCTACACGTTCAGCCAGCGCGAGGTGATCGCGCGTCCGGCTAACGAACGCCTCAACGTGCTCGTGCACCATGGAGCCGCCTGCGCCGGTGCCTACCTCCTGGCCATTCCAGTCCTAGTCGTGCTGTTCGTGTCGGGACACTTGCCACTCCGGCTCGCCCCGTGGTTCGGCCTACTGCTGGTGCTGGAGCACATCGGCCATTAT
PROTEIN sequence
Length: 123
VEGSQGINAVLRTGALASKFVLIMALARFLSPSEVGLFGLFMVTVTYAMLAVGLSFYTFSQREVIARPANERLNVLVHHGAACAGAYLLAIPVLVVLFVSGHLPLRLAPWFGLLLVLEHIGHY