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sw_11_scaffold_16840_1

Organism: SW_11_Gammaproteobacteria_65_8

partial RP 21 / 55 MC: 3 BSCG 23 / 51 MC: 2 ASCG 4 / 38 MC: 1
Location: 82..1113

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 300.0
  • Bit_score: 461
  • Evalue 9.70e-127
DNA-directed RNA polymerase subunit beta n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXS7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 300.0
  • Bit_score: 461
  • Evalue 6.90e-127
rpoB; DNA-directed RNA polymerase beta subunit similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 302.0
  • Bit_score: 451
  • Evalue 2.60e-124

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Taxonomy

gamma proteobacterium HTCC5015 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGGCATATTCCTTCACAGAGAAGAAGCGCATCCGGAAGGATTTCGGCAAGCGGACCTCCGTCCTGGAGGCGCCGTACCTGTTGCAAACGCAGCTCGAATCCTACCGGGACTTCTTGCAGGCCGACAAGGCGCCCGAAGAGCGCGACGAAGTCGGTCTTCACGCCGCATTCCAGTCCGTTCTGCCGATCGTCAGTTATTCCGGCAACGTCGAGCTGCAGTATGTCAGCTATCGCCTCGGCAAGCCCGCATTCGACGAGCGCGAGTGCAGCGTCCGCGGGCTGACGTTCTCGGCGCCGCTGCGCGTGTCGGTGCGGCTGGTCATCTTCGACAAGGGCACGAGCAACAAGAGCGTCAAGGACGTCAAAGAACAAGAAGTTTACATGGGCGAGCTACCGCTGATGACGGACACCGGGACGTTCATCATCAACGGCACCGAGCGCGTCATTGTTTCGCAGCTGCATCGCTCGCCCGGCGTGTTCTTCAACCACGACAAGGGCAAGAGCCATTCCTCGGGTAAGCTGCTGTTCTCGGCACGTGTCATCCCGTACCGGGGCTCATGGCTCGATTTCGAATTCGATGCCAAGGATTGCATCTACTGCCGCATCGACCGGCGCCGTAAGCTGCCGGCGACCGTGCTGCTGCGCGCGCTGGGCTACGACACCCAACAAATCCTTGACATCTTTTTCGACAAGAATCGTTTCCACATCGGCAGCGACAAGATCGAGCTCGAGCTCGTGCCGCAGCGGTTGCGCGGCGAGACGGCGCAGTTCGACATCACCGATGGGGAAAAGGTCATCGTCGAGGCCGGCCGGCGCATCACCGCGCGCCACATCAAGGAGCTCGAGAAGGCGGGCATCGACCGTCTGGCGGTGCCGCGCGAGTACCTCGAGGGGCAAAATCCTCGCTCACGATATCCCCGATCCGGATACGGGCGAGCTGCTGGCGAGTGCCAACGACGAGATCACGCCCGATGTCGTGGATCAGCTCGTCGAAAAGGGCATCAGCTCGATCGATACGCTCTACATCAATGA
PROTEIN sequence
Length: 344
MAYSFTEKKRIRKDFGKRTSVLEAPYLLQTQLESYRDFLQADKAPEERDEVGLHAAFQSVLPIVSYSGNVELQYVSYRLGKPAFDERECSVRGLTFSAPLRVSVRLVIFDKGTSNKSVKDVKEQEVYMGELPLMTDTGTFIINGTERVIVSQLHRSPGVFFNHDKGKSHSSGKLLFSARVIPYRGSWLDFEFDAKDCIYCRIDRRRKLPATVLLRALGYDTQQILDIFFDKNRFHIGSDKIELELVPQRLRGETAQFDITDGEKVIVEAGRRITARHIKELEKAGIDRLAVPREYLEGQNPRSRYPRSGYGRAAGECQRRDHARCRGSARRKGHQLDRYALHQ*