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sw_11_scaffold_22889_1

Organism: SW_11_Gammaproteobacteria_65_8

partial RP 21 / 55 MC: 3 BSCG 23 / 51 MC: 2 ASCG 4 / 38 MC: 1
Location: comp(2..808)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1215092 species="Bacteria; P similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 251.0
  • Bit_score: 311
  • Evalue 9.70e-82
Transcription-repair-coupling factor n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3B695_PSEAC similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 251.0
  • Bit_score: 311
  • Evalue 6.90e-82
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 255.0
  • Bit_score: 307
  • Evalue 4.80e-81

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Taxonomy

Pseudomonas alcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGCGCCGTCGCCGCCCGGGCGCGTGTTACCGCGGCCGCCCCGCCGCCAGTGTCCAGCAGGCGGCGACGCTTGAGCGCGAGATCACCTTCTACACTAACGGCGACCTGCCGGTGTTCCATTTCCCCGATTGGGAGACGCTGCCCTACGACCTGTTCTCGCCGCACCAGGACATCGTCTCGCAGCGACTGCGTACCCTTGACTGGCTGCCGACGGCACGCCATGGCGTGCTGGTCACGCCCGTGGCGACGTTGCTCCAGCGCGTGGTGCCGCCTTCGTATCTGGCCGGCCATGTCCTCGACCTGGAGGTCGGCCAGCAGCTTTCGATCGAGGCCTTGCGGCGGCGCCTCGAGCGCGGTGGCTATCGCCATGTCAGCCAGGTCCGCGAGCACGGCGAGTTCGCCGTCCGCGGCGCCCTCGTCGACCTATTCCCCATGGGTCGCGAGACACCGTTGCGCGTCGATTTCTTCGACGACGAAATCGACACGGTCCGCACCTTCGACCCCGAGACCCAGATCAGCGATCAGCGCGTGCGCGGTGTCCACATGCTGCCGGCGCGCGAATTCCCGCTGACCGAGCAAGGCATCGAGCAATTCCGCCGCGCCTTCCGCGAGGCCTTCGATACGGACGCGCGCAACAGCCCCGTCTATCGCGACGTCAGTAACGGCGTCGCGCCGGCCGGGCTGGAATACTACCTCCCGCTGTTCTTCGAGGAGACGGCGACACTGTTCGCGTATCTGCCGAGCAAGGCGCGCTACTTCCTGACCGAGGGCTGGCGCGAAGCGGCGCAGTCGTTCCGCGACCAAGTC
PROTEIN sequence
Length: 269
MRRRRPGACYRGRPAASVQQAATLEREITFYTNGDLPVFHFPDWETLPYDLFSPHQDIVSQRLRTLDWLPTARHGVLVTPVATLLQRVVPPSYLAGHVLDLEVGQQLSIEALRRRLERGGYRHVSQVREHGEFAVRGALVDLFPMGRETPLRVDFFDDEIDTVRTFDPETQISDQRVRGVHMLPAREFPLTEQGIEQFRRAFREAFDTDARNSPVYRDVSNGVAPAGLEYYLPLFFEETATLFAYLPSKARYFLTEGWREAAQSFRDQV