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sw_11_scaffold_6993_4

Organism: SW_11_Gammaproteobacteria_65_8

partial RP 21 / 55 MC: 3 BSCG 23 / 51 MC: 2 ASCG 4 / 38 MC: 1
Location: comp(756..1253)

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA-processing protein RimM n=1 Tax=Halomonas stevensii RepID=UPI00031CB226 similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 167.0
  • Bit_score: 162
  • Evalue 4.20e-37
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 164.0
  • Bit_score: 164
  • Evalue 2.40e-38
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapi similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 164.0
  • Bit_score: 164
  • Evalue 1.20e-37

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Taxonomy

Thiolapillus brandeum → Thiolapillus → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
TTGCGCGCGGTGGCGCTGGGCCGGATCGGCGCGCCGCACGGGGTACGCGGCTGGTGTCGCGTCCAATCATGGACGCGCCCGCACGCGGCCATCCTCGAGTTCGAGCGCTGGCTGGTCGGTGACGGCGACGAGCGCCGTGTAGTCCATCCGCTCGAGGGGCGCGAGACGGCCAAGGGGTTGATCGTTCGCCTGGCCGAGTGTGGCGACCGCGATGCCGTCACCGCGCTGCGCCACGCCACCGTCGCCGTGCCGCGGGAAGAGCTGCCCGAGCTGGCCGACGGCGAATGGTATTGGGCGGACCTGGAAGGGCTGCGGGTCGAGACGAGCGACGGCGCCGATCTGGGCCGGGTCGATCATCTACTCGAGACGGGGGCGAACGATGTCCTCGTCGTGCGCGGCGACCGGGAGCGCCTGATCCCGTGGGAGACTGAATCGGTGGTCGTCGCGGTCGAGCCCGATGCCGATCGCTTGGTCGTCGATTGGGACCCCGAGGTCTGA
PROTEIN sequence
Length: 166
LRAVALGRIGAPHGVRGWCRVQSWTRPHAAILEFERWLVGDGDERRVVHPLEGRETAKGLIVRLAECGDRDAVTALRHATVAVPREELPELADGEWYWADLEGLRVETSDGADLGRVDHLLETGANDVLVVRGDRERLIPWETESVVVAVEPDADRLVVDWDPEV*