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SW_11_Gammaproteobacteria_65_8

In projects: SW_11

Consensus taxonomy: Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Taxonomy override: Proteobacteria

Metagenomic Context

Parent: SW_11_UNK

Properties

Avg. coverage: 8.06 Longest contig: 9.18 Kbp Bin length: 593.26 Kbp GC content: 65.46 %
Contigs count: 348 Features count: 852 rRNAs count: 0 tRNAs count: 12

Genome completeness

partial RP 21 / 55 MC: 3 BSCG 23 / 51 MC: 2 ASCG 4 / 38 MC: 1
Displaying items 151-200 of 348 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_11_scaffold_21372
Species: Marinobacter santoriniensis (50%)
2 1280 bp 66.48 7.34 97.03
sw_11_scaffold_13128
Species: Arenimonas malthae (50%)
2 1168 bp 68.15 7.02 67.29
sw_11_scaffold_12669
Species: Azospirillum brasilense (50%)
2 2335 bp 62.61 9.16 32.12
sw_11_scaffold_5048
Species: Acidiphilium cryptum (100%)
2 2296 bp 61.63 10.37 91.72
sw_11_scaffold_12901
Species: Sedimenticola sp. SIP-G1 (50%)
2 1183 bp 65.77 8.28 82.92
sw_11_scaffold_22505
Species: Marichromatium purpuratum (50%)
2 2357 bp 62.54 7.59 53.84
sw_11_scaffold_12673
Species: Methylophaga nitratireducenticrescens (50%)
2 1197 bp 66.92 8.19 92.48
sw_11_scaffold_10600
Species: Nitrosococcus halophilus (50%)
2 1359 bp 68.06 8.31 98.68
sw_11_scaffold_10140
Species: BJP_IG2102_Gammaproteobacteria_62_140 (100%)
2 1404 bp 68.09 9.05 100.86
sw_11_scaffold_14751
Species: Halomonas sp. R57-5 (50%)
2 1070 bp 62.24 6.73 44.86
sw_11_scaffold_11758
Species: Halomonas salina (50%)
2 1719 bp 67.07 7.45 102.79
sw_11_scaffold_24936
Species: Ralstonia sp. PBA (50%)
2 1198 bp 62.44 6.09 79.63
sw_11_scaffold_14294
Species: Vibrio nigripulchritudo (50%)
2 1666 bp 64.05 6.84 76.89
sw_11_scaffold_11993
Species: Bordetella pertussis (50%)
2 1797 bp 68.39 8.79 63.94
sw_11_scaffold_14066
Species: R_Gamma2_60_33 (50%)
2 1111 bp 67.15 9.00 91.54
sw_11_scaffold_10380
Species: Lutibaculum baratangense (50%)
2 1382 bp 62.01 7.60 76.41
sw_11_scaffold_11767
Species: Candidatus Contendobacter odensis (50%)
2 1261 bp 64.87 7.85 85.88
sw_11_scaffold_14762
Species: Thioalkalivibrio sulfidiphilus (50%)
2 1070 bp 65.89 8.32 103.46
sw_11_scaffold_8754
Species: Arenimonas oryziterrae (50%)
2 2066 bp 66.07 7.41 96.71
sw_11_scaffold_11537
Species: delta proteobacterium NaphS2 (50%)
2 1279 bp 66.30 8.99 91.71
sw_11_scaffold_14302
Species: Alkalilimnicola ehrlichii (50%)
2 1095 bp 63.84 7.03 98.63
sw_11_scaffold_8526
Species: Haliangium ochraceum (50%)
2 1594 bp 64.68 8.09 85.82
sw_11_scaffold_10157
Species: Marinobacter sp. AK21 (50%)
2 1403 bp 67.07 6.77 89.81
sw_11_scaffold_26271
Species: Azotobacter sp. FA8 (50%)
2 1167 bp 63.24 8.48 84.58
sw_11_scaffold_12693
Species: Pandoraea sputorum (50%)
2 1196 bp 67.22 7.53 80.27
sw_11_scaffold_14769
Species: Roseobacter sp. AzwK-3b (50%)
2 1069 bp 62.96 7.39 62.58
sw_11_scaffold_9220
Species: Alcanivorax hongdengensis (50%)
2 1513 bp 65.63 8.53 101.32
sw_11_scaffold_7840
Species: Marinobacter nanhaiticus (50%)
2 1693 bp 66.27 10.63 93.92
sw_11_scaffold_16840
Species: gamma proteobacterium HTCC5015 (50%)
2 1555 bp 61.80 7.78 98.39
sw_11_scaffold_11322
Species: Nitrococcus mobilis (50%)
2 1298 bp 66.02 7.55 79.74
sw_11_scaffold_11785
Species: Candidatus Competibacter denitrificans (50%)
2 2458 bp 62.61 6.59 99.59
sw_11_scaffold_19517
Species: BJP_IG2102_Gammaproteobacteria_62_140 (50%)
2 1417 bp 67.47 6.21 83.20
sw_11_scaffold_6935
Species: Spiribacter sp. UAH-SP71 (50%)
2 1845 bp 67.64 7.91 99.35
sw_11_scaffold_7857
Species: Halomonas anticariensis (50%)
2 1691 bp 64.93 7.81 72.38
sw_11_scaffold_14098
Species: Allochromatium vinosum (50%)
2 1109 bp 68.26 7.30 90.62
sw_11_scaffold_14100
Species: Thioalkalivibrio sulfidiphilus (50%)
2 1109 bp 66.91 7.39 98.47
sw_11_scaffold_4406
Species: Halomonas sp. S2151 (50%)
2 3501 bp 62.41 6.63 97.43
sw_11_scaffold_13642
Species: Endozoicomonas elysicola (50%)
2 1136 bp 67.96 7.57 91.11
sw_11_scaffold_21625
Species: Marichromatium purpuratum (50%)
2 1669 bp 66.39 7.43 77.11
sw_11_scaffold_12031
Species: Sandaracinus amylolyticus (50%)
2 1240 bp 62.66 7.90 96.05
sw_11_scaffold_30910
Species: Nitrosococcus oceani (50%)
2 1038 bp 67.53 7.90 77.75
sw_11_scaffold_10655
Species: Thiorhodococcus sp. AK35 (50%)
2 1355 bp 61.85 8.27 93.21
sw_11_scaffold_26482
Species: Nitrosococcus halophilus (50%)
2 1162 bp 65.15 7.75 88.81
sw_11_scaffold_19595
Species: Desulfococcus oleovorans (50%)
2 1351 bp 64.54 7.70 98.15
sw_11_scaffold_12500
Species: Thiothrix nivea (50%)
2 1207 bp 67.11 7.13 95.69
sw_11_scaffold_15499
Species: R_Gammaproteobacteria_61_13 (50%)
2 1032 bp 61.92 5.14 88.66
sw_11_scaffold_4192
Species: Sinorhizobium americanum (50%)
2 2592 bp 68.36 7.48 96.06
sw_11_scaffold_11355
Species: Halorhodospira halophila (100%)
2 1295 bp 66.25 8.96 94.05
sw_11_scaffold_20621
Species: RBG_16_Gammaproteobacteria_51_14_curated (50%)
2 1406 bp 65.43 5.76 88.98
sw_11_scaffold_13200
Species: Halomonas anticariensis (100%)
2 1163 bp 67.84 9.11 99.83
Displaying items 151-200 of 348 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.