ggKbase home page

sw_11_scaffold_5596_3

Organism: SW_11_Chlorophyta_54_6

partial RP 6 / 55 MC: 1 BSCG 3 / 51 MC: 1 ASCG 6 / 38 MC: 1
Location: 883..1842

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|RuleBase:RU000617};; Flags: Fragment;; TaxID=9305 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammali similarity UNIPROT
DB: UniProtKB
  • Identity: 37.7
  • Coverage: 305.0
  • Bit_score: 201
  • Evalue 1.30e-48
PREDICTED: DNA ligase 1 n=1 Tax=Echinops telfairi RepID=UPI0003340360 similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 306.0
  • Bit_score: 203
  • Evalue 4.10e-49
ATP-dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 33.1
  • Coverage: 251.0
  • Bit_score: 148
  • Evalue 4.40e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sarcophilus harrisii → Sarcophilus → Dasyuromorphia → Mammalia → Chordata → Metazoa

Sequences

DNA sequence
Length: 960
ATGCGACTTGGAGCTAATCGAATCAGCGTCTTGCAAGCTTTTGGCTACGCTACCTATCTACATCATCGCTTCGGGCCTCGTAAAATATCTACTGCGGAAGAAAGCGCTATATCGAAAGAGGATTGGAACTGGGCTGGAAGCTCTGTCAAGCGATGCTTCAGCCTGCGTCCCGACTTGACAACTCTTCTCAAATGTCTAATACAAGGCGGCATAGAGAAGATGCTGCAAGAGTGCACATTGCGTCCTGGACTTCCTGTCCAGCCTATGCTTGGCCAGATCTCGCGTGGCATTGGTCATGCGGTGAAGCAATTCAACGGTGCTTTGCTTGCAGAATTCAAGTATGACGGCATGAGAGCGCAGATTCATATGACGCAAGATGAGATGAAAGTTTTCTCCAGGAAGAATGAGGACAAAACTGGCCAAATGCCGGATGTAGTGCGCATTGCTCGCGAGAAGCTTGCATCATCAGTCGAAAGCGCTGTCATGGACACTGAGTGCGTCGCAATCGACCGGAGCACCGGAAGATTCAAGTCGTTTCAAGAGCTGTCGACGCGCTCACGAAGCGACATTGATGAGAGCGAGGTCAATGTTGCGGTTGCAATATACGTGTTTGACATGATGTATCTTAATGGTGAATCACTTGTGGACAGACCCTTAGCTGAGAGGCGCTCCTTTGCTAAAGCGAGTCTTCATCATGTGGCAAACGAAATGCAGTTGGCAGAGAGCGAGGAGATTAGCGAAGACACCCCTCAAGAAGAATGTGAGGATAAAGTCACAAGCTTGCTGCACTCCAGCCTGTCGCAGCAGGGCGAAGGCTTGATGTTGAAGAAGCTCAACCAGCCTGGAGCGCTCTATGAACCAGGCCGTCGCTCAGAGAGCTGGATGAAGGCGCGCATGACGATATGGAATGTGTCACTCACCGGAACTGCGTTCGTGACTTCTTCCCTCTTTAGCTTCTGA
PROTEIN sequence
Length: 320
MRLGANRISVLQAFGYATYLHHRFGPRKISTAEESAISKEDWNWAGSSVKRCFSLRPDLTTLLKCLIQGGIEKMLQECTLRPGLPVQPMLGQISRGIGHAVKQFNGALLAEFKYDGMRAQIHMTQDEMKVFSRKNEDKTGQMPDVVRIAREKLASSVESAVMDTECVAIDRSTGRFKSFQELSTRSRSDIDESEVNVAVAIYVFDMMYLNGESLVDRPLAERRSFAKASLHHVANEMQLAESEEISEDTPQEECEDKVTSLLHSSLSQQGEGLMLKKLNQPGALYEPGRRSESWMKARMTIWNVSLTGTAFVTSSLFSF*