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SW_11_Chlorophyta_54_6

In projects: SW_11

Consensus taxonomy: Chlorophyta  →  Viridiplantae

Taxonomy override: Eukaryote

Displaying items 201-250 of 401 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_11_scaffold_26800
Species: Coccomyxa subellipsoidea (50%)
2 1182 bp 55.67 7.45 87.82
sw_11_scaffold_10532
Phylum: Chlorophyta (66.67%)
3 1366 bp 57.10 4.90 87.85
sw_11_scaffold_14303
Species: Ulva fasciata (50%)
2 1095 bp 54.89 5.30 87.95
sw_11_scaffold_7222
Domain: Viridiplantae (50%)
4 2987 bp 56.04 5.62 87.98
sw_11_scaffold_8180
Species: Amborella trichopoda (50%)
2 1643 bp 54.78 4.38 88.01
sw_11_scaffold_11379
Species: Physcomitrella patens (50%)
4 1293 bp 49.73 4.87 88.40
sw_11_scaffold_6533
Species: Tetraselmis sp. GSL018 (100%)
1 1923 bp 52.83 5.51 88.46
sw_11_scaffold_15935
Species: Triticum aestivum (50%)
2 1012 bp 56.13 5.43 88.64
sw_11_scaffold_12555
Species: Physcomitrella patens (100%)
1 1204 bp 53.99 5.56 88.70
sw_11_scaffold_25454
Species: Bathycoccus prasinos (50%)
2 1276 bp 58.62 5.80 88.87
sw_11_scaffold_12486
Species: Chlamydomonas reinhardtii (50%)
2 1208 bp 53.06 4.97 89.16
sw_11_scaffold_10816
Species: Populus trichocarpa (100%)
1 1341 bp 52.05 5.97 89.49
sw_11_scaffold_10798
Species: Coccomyxa subellipsoidea (50%)
2 1343 bp 54.50 5.81 89.58
sw_11_scaffold_12338
Order: Mamiellales (50%)
4 1218 bp 52.22 4.43 89.90
sw_11_scaffold_8449
Species: Ostreococcus tauri (50%)
2 1605 bp 54.95 4.61 89.91
sw_11_scaffold_9213
Species: Tetraselmis sp. GSL018 (50%)
2 1514 bp 54.16 5.42 89.96
sw_11_scaffold_16037
Species: Tetraselmis sp. GSL018 (100%)
1 1007 bp 50.84 5.06 89.97
sw_11_scaffold_11412
Species: Micromonas pusilla (50%)
2 1290 bp 52.71 6.28 90.00
sw_11_scaffold_3529
Species: Amborella trichopoda (50%)
2 2906 bp 53.34 4.82 90.02
sw_11_scaffold_7892
Species: Ostreococcus 'lucimarinus' (50%)
2 1686 bp 52.43 6.05 90.04
sw_11_scaffold_6394
Species: Volvox carteri (50%)
2 1950 bp 52.97 5.85 90.62
sw_11_scaffold_4833
Species: Tetraselmis sp. GSL018 (100%)
1 2361 bp 50.78 5.84 90.72
sw_11_scaffold_12648
Species: Ostreococcus 'lucimarinus' (100%)
1 1199 bp 58.22 5.59 91.08
sw_11_scaffold_15391
Species: Micromonas sp. RCC299 (50%)
2 1037 bp 51.11 5.11 91.13
sw_11_scaffold_3809
Species: Ostreococcus 'lucimarinus' (100%)
2 2768 bp 53.72 5.85 91.15
sw_11_scaffold_8427
Species: Tetraselmis sp. GSL018 (100%)
1 1608 bp 54.48 5.35 91.23
sw_11_scaffold_12461
Species: Micromonas sp. RCC299 (50%)
2 1210 bp 55.37 4.79 91.24
sw_11_scaffold_17296
Species: Brachypodium distachyon (50%)
2 1674 bp 54.60 6.33 91.40
sw_11_scaffold_11703
Species: Selaginella moellendorffii (100%)
1 1265 bp 58.26 5.06 91.54
sw_11_scaffold_13547
Species: Chlamydomonas reinhardtii (100%)
1 1142 bp 52.89 5.69 91.68
sw_11_scaffold_15429
Domain: Viridiplantae (66.67%)
3 1706 bp 54.45 5.74 91.79
sw_11_scaffold_9995
Species: Micromonas pusilla (100%)
1 1422 bp 55.84 5.34 91.98
sw_11_scaffold_12471
Species: Theobroma cacao (50%)
2 1209 bp 57.07 5.79 92.06
sw_11_scaffold_13714
Species: Arundo donax (50%)
2 1132 bp 50.88 4.77 92.23
sw_11_scaffold_17144
Order: Mamiellales (66.67%)
3 1575 bp 51.24 4.38 92.38
sw_11_scaffold_7584
Species: Micromonas pusilla (50%)
2 1734 bp 52.02 5.31 92.39
sw_11_scaffold_29954
Species: Micromonas sp. RCC299 (100%)
1 1104 bp 57.43 6.70 92.39
sw_11_scaffold_11561
Species: Coccomyxa subellipsoidea (50%)
2 2009 bp 56.69 5.72 92.73
sw_11_scaffold_12574
Species: Zea mays (50%)
2 1203 bp 54.86 7.23 92.77
sw_11_scaffold_13775
Species: Ostreococcus tauri (50%)
2 1128 bp 54.96 6.56 92.82
sw_11_scaffold_6917
Domain: Viridiplantae (66.67%)
3 1848 bp 55.03 5.14 92.86
sw_11_scaffold_19831
Order: Brassicales (66.67%)
3 1660 bp 49.34 5.18 92.89
sw_11_scaffold_13339
Genus: Micromonas (50%)
4 2028 bp 50.30 5.47 93.05
sw_11_scaffold_10795
Species: Bathycoccus prasinos (66.67%)
3 1943 bp 51.21 4.68 93.10
sw_11_scaffold_10139
Species: Ostreococcus 'lucimarinus' (100%)
1 1404 bp 52.71 5.27 93.38
sw_11_scaffold_13265
Species: Arabidopsis thaliana (100%)
1 1159 bp 54.87 6.99 93.44
sw_11_scaffold_5161
Genus: Ostreococcus (50%)
4 2263 bp 48.96 5.74 93.46
sw_11_scaffold_10825
Species: Micromonas sp. RCC299 (50%)
2 1340 bp 60.75 5.22 93.81
sw_11_scaffold_11434
Species: Micromonas pusilla (50%)
2 1288 bp 54.58 5.82 93.87
sw_11_scaffold_10044
Species: Selaginella moellendorffii (50%)
2 1417 bp 60.34 5.72 94.00
Displaying items 201-250 of 401 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.