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sw_12_scaffold_1122_3

Organism: SW_12_Salinibacter_ruber_64_60

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 2537..3376

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 279.0
  • Bit_score: 536
  • Evalue 3.90e-150
rpoD; RNA polymerase sigma-70 factor; K03086 RNA polymerase primary sigma factor id=24657877 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 280.0
  • Bit_score: 536
  • Evalue 1.40e-149
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CBH25085.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 279.0
  • Bit_score: 536
  • Evalue 1.90e-149

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 840
ATGCAAGTTTCTCGCGAACAACGGATGCTGGACCAGTACCTTCAGGAAATCGGGAAGATTGACCTTCTCGAACCGGAGGAGGAGGTCGAGCTGGCACGACGTATTGAGGACGGAGACGAGGAGGCCCTCCACCAGCTCTGCCGTGCCAACCTGCGCTTCGTGGTGTCGGTCGCCAAGAAGTACCAGGGACAAGGCCTATCGCTGGCCGACCTGATCAACGAAGGCAACTACGGCCTCATCAAGGCGGCCAAGCGATTCGACGAGACGCGTGGATTCAAATTTATCTCCTACGCCGTCTGGTGGATTCGGCAGGCCATCCTGCAGGCCCTCGCCGAGCAAAGTCGCGTGGTGCGGCTCCCCCTCAACCGCATCGGCACCATCTCGAAGATCCGCAAGGCCAGTGCCCGCCTCCAGCAGGATCTCGACCGCAAGCCCAACATCGAGGAGCTGGCCGAGGAGCTTGAGATCGATGTCCGGAAGGTGCGCGAGGCGATGAAGCACACCAGCCGCCACCTCTCGATGGACGCTCCCTTCAACGAGGAGGATGACAACAGCCTCCTCGACGTGCTGCCGGACGAGGAAAGCGACTCGCCCGACGAGGAGATGCTCTCCGAGTCGGTGAAGATTGACATCGAGCATGCCCTCAGCGCCCTGCACGACCGCGAGGCCGAAATCACGCGCCTCTACTTCGGCATCGGGCGGGAGCACCCGCTAACACTTGAGGAGATTGGCAAGCGGTTCGACCTCACGCGGGAGCGCGTCCGCCAGATCAAGGAAAAGGCCCTCCGGAAACTTCGTCAGCGTCACAGTCGACAAGACCTCCAGCCGCATACTGACTAG
PROTEIN sequence
Length: 280
MQVSREQRMLDQYLQEIGKIDLLEPEEEVELARRIEDGDEEALHQLCRANLRFVVSVAKKYQGQGLSLADLINEGNYGLIKAAKRFDETRGFKFISYAVWWIRQAILQALAEQSRVVRLPLNRIGTISKIRKASARLQQDLDRKPNIEELAEELEIDVRKVREAMKHTSRHLSMDAPFNEEDDNSLLDVLPDEESDSPDEEMLSESVKIDIEHALSALHDREAEITRLYFGIGREHPLTLEEIGKRFDLTRERVRQIKEKALRKLRQRHSRQDLQPHTD*