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sw_12_scaffold_629_11

Organism: SW_12_Salinibacter_ruber_64_60

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(12878..13453)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCY4_SALRM similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 191.0
  • Bit_score: 306
  • Evalue 2.10e-80
sigW; RNA polymerase sigma factor sigW similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 191.0
  • Bit_score: 306
  • Evalue 5.80e-81
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 191.0
  • Bit_score: 306
  • Evalue 2.90e-80

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 576
ATGTCGCACGACGCGTCCGATGCCACGCACGCCCGCCGCGTGCAGGACGGGGACCGGGAGGCCTTCGAGGTGCTCGTGGAGCGGTACCAGGGCATGGTGTTCGACCTCACGCATCAGTACGCCGAACAACCCGAGGCCGCCGAGGACCTGGCACAGGATGTCTTCCTCAAGGCATACCGCCGGATCGAGGACCTTCGAAACCCCGACCAGTTTGCGTCTTGGCTCTACGGCATTGCCCTCAATCAATGCCGCGACTACGCTAAGAACGTGCGACGCGACACCCATCCGTTCAGCCGCTCCGAGCAGGAAAATGCGGCGGTGCAGGACGACGAAACCACGGCGCAGGACGACCGGCTCATCGCCGACGAACAGGGGGCACACCTCTGGGACGCTCTGGACGAACTCTCGGCCGCCTACGCCACCCCGTTCCTGTTGAAATATCGGGACGGACTCACGTACAAGGCCATGGCGAAGCGACTCGACGTGTCGGTGAGCGCCCTGAAGGTGCGTGTGCACCGCGCTCGCAAGAAACTCCGAAGCCTGCTTGAGCCCTACCATGAAAAATCCCGATCCTGA
PROTEIN sequence
Length: 192
MSHDASDATHARRVQDGDREAFEVLVERYQGMVFDLTHQYAEQPEAAEDLAQDVFLKAYRRIEDLRNPDQFASWLYGIALNQCRDYAKNVRRDTHPFSRSEQENAAVQDDETTAQDDRLIADEQGAHLWDALDELSAAYATPFLLKYRDGLTYKAMAKRLDVSVSALKVRVHRARKKLRSLLEPYHEKSRS*