ggKbase home page

sw_12_scaffold_1201_7

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(4133..4489)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:EMA49057.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA49057.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 118.0
  • Bit_score: 216
  • Evalue 2.40e-53
rpoF; DNA-directed RNA polymerase subunit F (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 118.0
  • Bit_score: 178
  • Evalue 8.70e-43
DNA-directed RNA polymerase subunit F n=2 Tax=Halococcus RepID=M0MR97_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 118.0
  • Bit_score: 216
  • Evalue 1.80e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 357
ATGACGATCTTCAAGGAGCGCCTCGACGAGGAGTACCTCACGCTCGCCGAGACCAAGGAGCTGCTCGCCGACGTCGAAGCCGAGCACGCCGCCGACGAGGACCGCGAGATGCCCTACGAGCTCGCGCGCGCCATCGAGCACGTCAATCGGTTCGCCGAACTCGCCCCCGAGGAGTCCCGCGAGTTCGTGGCCGAGCTCCGCGAGCACAAGAAGGTCGACGAGCCGACCGCCTTCAAGATCGCGGACCTCAAACCTACCAACCGCGACGAGCTCCGCGCGATCTACGCCCAGGAGCGCTTCTCGCTGTCGGGCGACGAGCTCGACGAGGTTCTCGACATCGTGGCGAAACACGTCTGA
PROTEIN sequence
Length: 119
MTIFKERLDEEYLTLAETKELLADVEAEHAADEDREMPYELARAIEHVNRFAELAPEESREFVAELREHKKVDEPTAFKIADLKPTNRDELRAIYAQERFSLSGDELDEVLDIVAKHV*