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sw_12_scaffold_1592_7

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(4752..5228)

Top 3 Functional Annotations

Value Algorithm Source
Sugar-specific transcriptional regulator TrmB n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NUV0_HALBP similarity UNIREF
DB: UNIREF100
  • Identity: 31.1
  • Coverage: 161.0
  • Bit_score: 84
  • Evalue 8.10e-14
Sugar-specific transcriptional regulator TrmB similarity KEGG
DB: KEGG
  • Identity: 31.1
  • Coverage: 161.0
  • Bit_score: 84
  • Evalue 2.30e-14
Sugar-specific transcriptional regulator TrmB {ECO:0000313|EMBL:ADQ68939.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halog similarity UNIPROT
DB: UniProtKB
  • Identity: 31.1
  • Coverage: 161.0
  • Bit_score: 84
  • Evalue 1.10e-13

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Taxonomy

Halogeometricum borinquense → Halogeometricum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 477
GTCGAACTCGACACCGCGTTGCTGGCCGGCGCGGAGATCGTCACCCAGAAGCCGGTCGCGCCACACGCCCCCGGAACGCACCTGAGCGAACTGATCGAGGCGGTCGATCGCATGAGCTGTGTGACTTGTGCACACAGCCATTCCCGAGCAATGGAGATCGTCCACTCGTTGGCCACCGACGGCGTCGAAATGGAGTTCGTCTTCCCGACAGCCCTCTTCGAGTACGTCCGTTCGTCACGTCCCGACCGGCTCTCACAGCTGCTCGAACTGCCGAACTACGAGACCCGGATCGTCGACGAGACCCCCTACGGGCTGTTCCTGCTGGAGAACGGCGACGAAACCAGGGTCTGTCTACTGATCTACAGCCCGGACAACGAGATGAAAGGCGTGATCTCGAATACCTCGGAGGAGGCCGTCGAGTGGGGCGAGCGGGTCTATCGCTCCTACGAGAGCCGTGCCGAGCCAGTAACGGCCTGA
PROTEIN sequence
Length: 159
VELDTALLAGAEIVTQKPVAPHAPGTHLSELIEAVDRMSCVTCAHSHSRAMEIVHSLATDGVEMEFVFPTALFEYVRSSRPDRLSQLLELPNYETRIVDETPYGLFLLENGDETRVCLLIYSPDNEMKGVISNTSEEAVEWGERVYRSYESRAEPVTA*