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sw_12_scaffold_1934_4

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(2653..2940)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7V0_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 189
  • Evalue 1.80e-45
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 189
  • Evalue 2.60e-45
transcription initiation factor TFB similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 95.0
  • Bit_score: 181
  • Evalue 1.10e-43

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 288
ATGCGTCCCGTCGATCCCAAGAAGTACGTCCCCCGCTTCTGTTCGGAACTCACCCTCTCCGAGGAGGTCCAGTCGAAGGCCAACGACATCATCGAGACCACCGCCGAGAAGGGGCTGCTCTCGGGGAAGTCCCCGACCGGGTACGCCGCCGCCGCGATCTACGCCGCCTCCCTGCTCTGCAACGAGAAGAAAACCCAGCGCGAGGTCGCCGACGTCGCCCAGGTGACCGAAGTCACCATTCGGAACCGGTATCAAGAGCAGATCGAGGCGATGGGGATCCACGGGTAG
PROTEIN sequence
Length: 96
MRPVDPKKYVPRFCSELTLSEEVQSKANDIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIEAMGIHG*