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sw_12_scaffold_2169_5

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(4555..6225)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=1227455 species="Archaea; Eurya similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 561.0
  • Bit_score: 918
  • Evalue 6.10e-264
DNA-directed DNA polymerase (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 557.0
  • Bit_score: 775
  • Evalue 1.30e-221
DNA polymerase II small subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDF1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 561.0
  • Bit_score: 919
  • Evalue 1.50e-264

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1671
GTGCCGCGCCCGACACCGGCCGAGGTCGTGAACGAGCTCGCCACGAGGGGCTACAACGCCGAGCGCGAGGCCGTGACCCTGCTCGCGCGAGCGAACGACCTCGAAAACGCGATCGAGCGCGCGACCGAGACCGTCCCGGACGGGACGCTCACCCTCTCGGCCGACGACGTCGAGGCCGCCGTCCGAACCGCCGACCTCGCCGACGCCACCGGTCCGCCTCCCGATAACACCGACGGTTCGCCGCCAGGCGCTCGCGGCGACTCAGCCGCCGCCACCCCCACCGATGCCGCCGATTCCGGCAGCATTTCGGCCAAAACCCCCAATCAGCCCCGCTCCGACCCCTCCGTTTCGAGTGGAACGACGACCCACGAGACCGACGGTCAAACCGACTCTCCAGTGGAAACGAAGGGGTCGACGGAAAGCAGGACAGCCGAGAGCGGGACCACCGAGCGCTCCGTAGACCCGGATCTCCGTTCGCTCGACGTACAAGGCGACGTCACCGGCCGGAGCACCGGCACGGGCGAGTACGCCGATTTCGTTGCGACGTTCCGGGACCGATACGAACGCCTCTCCGGCCTCCTGCGCTCGCGGGTTAACCACCGACCGACCGAGGCGGTTGACGCGATGGCAGGCGGGAGCGACGCCGCCATCGTGGGGATGATCACGGACATCCGCTCGACCGCGAACGGTCACTGGTTGGTCGAACTCGAAGACACGACCGGAACGTTTCCCTGTCTCGTCCTCAAGGACCGCGAGATCGCAAGCGTCGTCGACGAACTCCTGCTCGACGAACTCGTCGCGGTCGAGGGCACGCTCGCGGGCGACGGGGGCATCCTGTTCGTCGACGAACTCCACTTCCCCGACGTTCCCCGGACGTACCGCCCTTCGACCGCCGACCGCCACGTTCGCGCGGCGCTCATCTCCGACGTCCACGTCGGCAGTCAGGAGTTCGCGACCGATGCGTGGTCGGCCTTCGCCGACTGGCTTCACACTGAGGACGCAGCAGCGGTCGAGTATCTCCTCGTTGCGGGCGACATGGTCGAAGGGGTCGGGGTCTACCCGGATCAGGACGAGGAGCTCGACATCGTCGACATCTACAACCAGTACGAGGCCTTTGCCGAACGGTTGAAGGAGGTGCCTGGCGACATCGAGATCCTCCTGATCCCGGGCAACCACGACGCCGTCCGGCTCGCCGAACCACAGCCGGGCTTCGACGAGGAACTCCGTGGGATCATGGAGGCCCACGACGCGCGCTTCTCAGGCAACCCCTCGACCGTCACGATCGAGGGCGTCACGATACTGATGTACCACGGCGTCAGCCTCGACGAGGTGATCGCCGAACTCCCCGAAGAGAAGGCCAACTACGATGAACCCCACAAGGCAATGTACCAGCTCCTCAAGAAACGTCACGTCGCGCCCCAGTACGGCGGCCACACCAGGCTCGCCCCCGAAGAGCGTGACTACCTCGTGATGGAGGAGATCCCAGATGTCTTTCATACTGGTCACGTCCACAAGCTCGGCTACGGCAAGTACCACAACGTGCTCGCGATCAACTCGGGCTGCTGGCAGGAACAGACGTCCTTCCAGCGCAGCGTCAACATCGATCCCGACGTTGGCTACGCGCCAATCCTCGACCTCGACACGCTCGATCTGACGATCCAGAAGTTCTAA
PROTEIN sequence
Length: 557
VPRPTPAEVVNELATRGYNAEREAVTLLARANDLENAIERATETVPDGTLTLSADDVEAAVRTADLADATGPPPDNTDGSPPGARGDSAAATPTDAADSGSISAKTPNQPRSDPSVSSGTTTHETDGQTDSPVETKGSTESRTAESGTTERSVDPDLRSLDVQGDVTGRSTGTGEYADFVATFRDRYERLSGLLRSRVNHRPTEAVDAMAGGSDAAIVGMITDIRSTANGHWLVELEDTTGTFPCLVLKDREIASVVDELLLDELVAVEGTLAGDGGILFVDELHFPDVPRTYRPSTADRHVRAALISDVHVGSQEFATDAWSAFADWLHTEDAAAVEYLLVAGDMVEGVGVYPDQDEELDIVDIYNQYEAFAERLKEVPGDIEILLIPGNHDAVRLAEPQPGFDEELRGIMEAHDARFSGNPSTVTIEGVTILMYHGVSLDEVIAELPEEKANYDEPHKAMYQLLKKRHVAPQYGGHTRLAPEERDYLVMEEIPDVFHTGHVHKLGYGKYHNVLAINSGCWQEQTSFQRSVNIDPDVGYAPILDLDTLDLTIQKF*