ggKbase home page

sw_12_scaffold_2964_6

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(3707..4078)

Top 3 Functional Annotations

Value Algorithm Source
Probable histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229};; TaxID=1227456 species="Archaea; E similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 103.0
  • Bit_score: 180
  • Evalue 2.00e-42
histidine ammonia-lyase (EC:4.3.1.3) similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 97.0
  • Bit_score: 144
  • Evalue 2.50e-32
Probable histidine ammonia-lyase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6J7_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 103.0
  • Bit_score: 180
  • Evalue 1.40e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 372
ATGGAAACCATGAGTGAGCGCGAACCGGTCGTCCTCGACGGGGCGTCACTCACCCCCGAGGACGTGGCGAGGGTCGCTCGCGACGGCGCGAGGGTGACGATCGCCGAATCCGCGCGCGAAGCCGTCAGGGAGTCCAGGGAGCGCGTCGAAGAGGTCATCGAGAGCGGCGAGGCAGTCTACGGGCTGAACACCGGGTTCGGCCAGCTCGTGACCGAACGCATCCCCGAGAGCGAGCGCGAGCGCCTCCAGACCAACCTCGTCCGGAGCCACGCCTCGGGCGTGGGCCGCGAACTCGACCGTAAGGAAGTACGAGCGATGAGAGGGGATCCATCCGGTCGTCCGGTCGCGGGGCAGTCTCGGCGCGAGCGGTGA
PROTEIN sequence
Length: 124
METMSEREPVVLDGASLTPEDVARVARDGARVTIAESAREAVRESRERVEEVIESGEAVYGLNTGFGQLVTERIPESERERLQTNLVRSHASGVGRELDRKEVRAMRGDPSGRPVAGQSRRER*