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sw_12_scaffold_2346_5

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(3660..4139)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDE1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 159.0
  • Bit_score: 284
  • Evalue 9.20e-74
RNA-binding protein {ECO:0000313|EMBL:EMA43363.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 159.0
  • Bit_score: 284
  • Evalue 1.30e-73
universal PUA-domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 159.0
  • Bit_score: 223
  • Evalue 3.20e-56

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 480
ATGCAGGTCAGATCCCGCCACCATCTCAGAAGCGACGCGGTCGACGAGATCGAGCGAACGCTCGCCGATCGACTCGGCGTCGACCTCGCTGGCGACACCTACGAGCGCGTCGAGTTCGCCGAGAGCGACTGCGACCTCGTGCTGGTCGACGGCGACCCGCTGGTGATCTACCTCGACGACGAGCCGTTCCTCACCGTGCGCGGCGCGAACGCCCACCCGGCCGAGACGGGCGTCGTCACCGTCGACACCGGCGCGATCTCCTTCGTTTCCGACGGTGCGGACGTGATGCGGCCGGGCATCACCGACGCCGGCCCGGAAATCGATTCGGGCCAGTACGTCGTGATCGTCGAGGAGGCCCACGGCAAGGCCCTCGCGATCGGGCGCGCGCTCGTCGACGGCGACGGGATGTCCGGCGATTCGGGGAGGGTCGTCGAGTCGATCCACCACGTCGGCGACGACCTCTACGAGTTCTCTATCTGA
PROTEIN sequence
Length: 160
MQVRSRHHLRSDAVDEIERTLADRLGVDLAGDTYERVEFAESDCDLVLVDGDPLVIYLDDEPFLTVRGANAHPAETGVVTVDTGAISFVSDGADVMRPGITDAGPEIDSGQYVVIVEEAHGKALAIGRALVDGDGMSGDSGRVVESIHHVGDDLYEFSI*