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sw_12_scaffold_3450_5

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(2315..3457)

Top 3 Functional Annotations

Value Algorithm Source
Transposase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FSK9_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 375.0
  • Bit_score: 676
  • Evalue 2.00e-191
Transposase {ECO:0000313|EMBL:ELZ62252.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 375.0
  • Bit_score: 676
  • Evalue 2.80e-191
transposase, IS605 OrfB family, central region similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 376.0
  • Bit_score: 671
  • Evalue 1.10e-190

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Taxonomy

Halorubrum hochstenium → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1143
TTGCGGTGCGCCCGCGATCTGTTGGACGCCTCCGCCAGCCTGTGGAACGAAGTCGATTACGAACGTCGCCAGAACTTCTTCGACGGCGACAGCGTGTGGGATCCCGCCGACTACCGCAAGCAGTACGTCGGCGTTCTCGGCTCCGCCATCGCACAGCAGGTCATCCGCAAGAACAGCGAGGCGTGGCGGTCGTTCTTCGCCGCCCGAGAAGACGGCGAGGATACTGCCCCACCCGGCTACTGGGGCGACGAAGACGACGGCAGAGAGTTGCGGACGTACATCCGCAACGACCAGTACACCCTCGAAACCGGCGAACGGAGTCGCCTCGAAATCCCCGTGGGCCAAGACTTGAAAGAGGAGTACGGTCTTGGCTACCACGACCGCTTGCGTCTTGAGGTCGCTGGCAACCCGAAGTGGAAGGGTGAACAGGGTCGGTTGGAACTGTACTACGACGAGGTGGACGCCGCGTTCAGGGCCATTCAGCCTGTCAGCGTCGATGATTCTCGACAGGATTCACCACTGGCTTCGGAAGAAGCCGCTCTGGACGTGGGCGCGAACAACCTCGTCGCCTGTACGACCACAACCGGGCAGCAGTACCTCTACGAGGGGTGCGACCTGTTCGCCCGCTTCCGCGAAACCACCGAGGAAATCGCTCGTTTGCAGTCCAAACTCCGTGAGGGGCGGCACAGCAGTCAGCGGATTCGACGACTGTACCGCAAGCGGACAAGACGGCGCGACCACGCGCAGGACGCGCTCGTCCGGGAGCTGATGGAACGACTGTACGACGAGGGCGTGGCGACGGTGTACGTCGGAGACCTCACCGACGTGTTGTCGGCATACTGGTCGGCAGAGGTGAACGAGAAAACACACCAGTTCTGGGCGTATCGCTCGTTCATAGACCGCCTCGCCACGACTGCCGAAGAGTACGACATCACGGTCGAAGTCGAGTCTGAAGCATACACGACGGCGGAGTGTCCGGTGTGTGGCGAGCGCGACGATACAGACCGGAACGGCGATGCGTTTCGGTGCTCGTGTGGCTACGAGGGACACGCCGACCTCGACGCTTCGCGGACGTTCCTCGAACGGCACGCTGGCACGAATCTGGAAGTCGGGTCGATGGCACGGCCCGTGTGCCTCAAGTGA
PROTEIN sequence
Length: 381
LRCARDLLDASASLWNEVDYERRQNFFDGDSVWDPADYRKQYVGVLGSAIAQQVIRKNSEAWRSFFAAREDGEDTAPPGYWGDEDDGRELRTYIRNDQYTLETGERSRLEIPVGQDLKEEYGLGYHDRLRLEVAGNPKWKGEQGRLELYYDEVDAAFRAIQPVSVDDSRQDSPLASEEAALDVGANNLVACTTTTGQQYLYEGCDLFARFRETTEEIARLQSKLREGRHSSQRIRRLYRKRTRRRDHAQDALVRELMERLYDEGVATVYVGDLTDVLSAYWSAEVNEKTHQFWAYRSFIDRLATTAEEYDITVEVESEAYTTAECPVCGERDDTDRNGDAFRCSCGYEGHADLDASRTFLERHAGTNLEVGSMARPVCLK*