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sw_12_scaffold_3331_2

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(213..953)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUY6_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 246.0
  • Bit_score: 458
  • Evalue 5.50e-126
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 246.0
  • Bit_score: 458
  • Evalue 7.70e-126
rpl4lp; 50S ribosomal protein L4P similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 248.0
  • Bit_score: 359
  • Evalue 7.50e-97

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 741
ATGAGCGCAACAGTCTACGACACCGACGGCGGCGAGGCGGGCGAGGTCGAACTCCCCACGGTATTCGAGACGCCGTACCGGCCCGACCTGATCGGCGATGCGGTGCGCGCCGCGCAGGCGAACCGCACCCAGGCGACCGGCGCGGACGACTACGCCGGGATGCGCACGCCCGCCGAGTCACATGGCAGCGGTCGCGGCATGGCCCACGTTCCCCGATCGAACGGGCAGGGCCGCCGCGTCCCCCAAGCCGTGGGCGGCCGGAAGGCCCACCCGCCGAAGGAGGAGACGGACGGCTCGAAGCAGATCAACACGAAGGAGCGAAAGCTCGCCACCCGGAGCGCGATCGCGGCGACGACCGACGCCGAACAGGTGAAAGAGCGCGGTCATCAGTTCGAGGATCGCGATCTCCCGCTCGTAGTGAGCGACGAGTTCGAGAACCTCGTGAAGACCCAGGAGGTCGTCTCCCTGCTCGAATCGCTCGGCGTCCACGACGACATCGAGCGTGCCGAGGACAAGAAGATCCGCGCGGGACGCGGGACGACGCGTGGCCGGAAGTACAAGCGGCCGTCGTCGATCCTGTTCGTCACGAGCGACGAACCCTCGCGCGCGGCGCGAAACCTCGCGGGGGCGGACGTCGCCACCGCACGAGAGGTCAACACCGAAGACCTCGCGCCGGGCGCACAGGGCGGCCGGCTGACGATCTGGACCGAGAGCGCCATCGAGGAGGTAGCGGACCGATGA
PROTEIN sequence
Length: 247
MSATVYDTDGGEAGEVELPTVFETPYRPDLIGDAVRAAQANRTQATGADDYAGMRTPAESHGSGRGMAHVPRSNGQGRRVPQAVGGRKAHPPKEETDGSKQINTKERKLATRSAIAATTDAEQVKERGHQFEDRDLPLVVSDEFENLVKTQEVVSLLESLGVHDDIERAEDKKIRAGRGTTRGRKYKRPSSILFVTSDEPSRAARNLAGADVATAREVNTEDLAPGAQGGRLTIWTESAIEEVADR*