ggKbase home page

sw_12_scaffold_3331_6

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: 3933..4403

Top 3 Functional Annotations

Value Algorithm Source
XerC/D-like integrase n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18F94_HALWD similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 154.0
  • Bit_score: 176
  • Evalue 2.60e-41
phage integrase similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 154.0
  • Bit_score: 176
  • Evalue 7.40e-42
XerC/D-like integrase {ECO:0000313|EMBL:CAJ53364.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain D similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 154.0
  • Bit_score: 176
  • Evalue 3.70e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Haloquadratum walsbyi → Haloquadratum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 471
ATGGATGCGGGCTTCAGACCGGTTGAGATAGGGCGGGCGAAAACGTCGTGGCTCGACCTCGAAAACGGGTTGTTCCGGATTCCGAAAGAAGAGTCCTCGAAGAACACCGACAACTGGACGGTGAGTATCGGTGAGCGCACCGCGAACATTCTCCGGAAATGGATGTCGGAGCGAGAGAACTACTCGAAATACCAGGATACGGACGCGCTCTGGCTGACGAAATACGACAATCCGTACAGTAGCAAGTCGCTCAACGATCTACTGGACAATCTGCGTGAGGCCGCGGGTATTCCTGAGCGCCAGGATATGACGTGGTATTCGATCCGACACTCGGTCGGAACGAAGATGAACGAGGACCAGGGACCGGACGCGGTACAGCAGCAGCTCCGGCAGAAGTCCTATGAAATGGCGGTCCGGTACGATCAGGCACCCGCCGGGAAACGGAAGGAAACAGTCGACAGCTGGGATTGA
PROTEIN sequence
Length: 157
MDAGFRPVEIGRAKTSWLDLENGLFRIPKEESSKNTDNWTVSIGERTANILRKWMSERENYSKYQDTDALWLTKYDNPYSSKSLNDLLDNLREAAGIPERQDMTWYSIRHSVGTKMNEDQGPDAVQQQLRQKSYEMAVRYDQAPAGKRKETVDSWD*