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sw_12_scaffold_4166_1

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(3..218)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1232219 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 72.0
  • Bit_score: 134
  • Evalue 7.40e-29
DNA-directed RNA polymerase n=3 Tax=Halococcus saccharolyticus RepID=C5NSC9_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 72.0
  • Bit_score: 134
  • Evalue 5.30e-29
DNA-directed RNA polymerase subunit B' similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 72.0
  • Bit_score: 121
  • Evalue 7.70e-26

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Taxonomy

Halococcus sp. 62E → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 216
ATGAGCCGGGCACGCGACGCGAAAGTCTACGTCAACGGTAGCCTGGTCGGCACGCACGACCAGCCCGAACAGCTCGCTCATCAAGTACGGGAGGCACGTCGCCGCGGGGACGTGGCCGAGACGGTGAACGTCTCGGTCAAGGACTACACCGACGAGGTCATCATCAATGCCGACGCCGGCCGGGCGCGACGGCCGTTGATCGTGGTCGAGGAGGGC
PROTEIN sequence
Length: 72
MSRARDAKVYVNGSLVGTHDQPEQLAHQVREARRRGDVAETVNVSVKDYTDEVIINADAGRARRPLIVVEEG