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sw_12_scaffold_5248_1

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(3..770)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M1A8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 257.0
  • Bit_score: 467
  • Evalue 7.20e-129
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 257.0
  • Bit_score: 467
  • Evalue 1.00e-128
tfbA2; transcription initiation factor TFB similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 267.0
  • Bit_score: 441
  • Evalue 1.60e-121

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Taxonomy

Halococcus hamelinensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 768
ATGAGCGACACAACGACCCGAATCAACCGCGAGGAAGAGACCCGAGAGACCGAGACCGAACAGGAAGAGGAGGCCCCCGAGGACGAGCTGGTCTGCCCGGAGTGTGGCGGCCGCCTCGTGAGCGACACCGAGCACGGCGAGACCGTGTGCACCGACTGCGGGCTGGTGGTCGAGACCGACGAGATCGACCGTGGCCCCGAGTGGCGGGCGTTCGATTCGGCCGAGCGCGACCAGAAGTCCCGCGTCGGGGCCCCGACGACGAACATGATGCACGACAAGGGCCTCTCCACGAATATCGGCTGGCAGGACAAGGACGCCTACGGCAACAGTCTCTCCAGCCGCCAGCGCCAGAAAATGCAGCGCCTCCGTACGTGGAACGAGCGCTTCCGGACGAGGGACTCCAAAGAGCGCAACCTCAAACAGGCCCTCGGCGAGATCGACCGGATGGCGAGTGCGCTCGGTCTTCCGGATTCGGTCCGCGAGACCGCGAGCGTCATCTACCGCCGTGCGCTCGACGAGGACCTCCTCCCCGGACGCTCGATCGAGGGCGTCTCCACGAGCGCGCTGTACGCCGCCGCGCGCCAGGCAGGCACGCCCCGATCGCTCGACGAAATCGCCACCGTCTCCAGGGTCGACAAGAGCGAGGTCGCCCGGACGTACCGGTACGTGGTGCGCGAGCTCGGCCTCGAGATCCAGCCCGCCGATCCCGCGAGCTACGTCCCCCGGTTCGCCTCCGATCTCGACCTCTCCGAGGAGGCAGAGCGCCGC
PROTEIN sequence
Length: 256
MSDTTTRINREEETRETETEQEEEAPEDELVCPECGGRLVSDTEHGETVCTDCGLVVETDEIDRGPEWRAFDSAERDQKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNSLSSRQRQKMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPDSVRETASVIYRRALDEDLLPGRSIEGVSTSALYAAARQAGTPRSLDEIATVSRVDKSEVARTYRYVVRELGLEIQPADPASYVPRFASDLDLSEEAERR